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Name : Ssed_3929 (Ssed_3929) Accession : YP_001475661.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 4799466 - 4800935 bp Length : 1470 bp Strand : - Note : KEGG: slo:Shew_3173 succinic semialdehyde dehydrogenase DNA sequence : ATGCAAGATCTTAAAGACCCCAGTTTGGTTAAGCTCAGCTCTTATATCGATGGCCGATGGAGCGAGGCTGGTATTGCTTC CTCTGTCACTTTTGAAGTGACCAACCCTGCTAATGATAGCGTCGTTGCCAATGTGCTTAATGCCGGTATCGATGAAACCG AGGCGGCAGTACTGGCTGCGAAGAGAGCCCTTCCGGCCTGGTCTAAAAAGTCAGCTAACGAGCGAGCCGCCATACTCAGA GCCTGGTTCAACCTCATGATGGCGAATCAAGATGACCTGGGACGGATCCTGACTCTGGAACAGGGTAAGCCCCTCGCCGA AGCGAAAGGTGAAATTGGTTATGGTGCCGCTTTCATCGAATGGTTTGCCGAAGAGGGAAAGCGCGTCTATGGAGATACGA TTCCGGCGCCATCGGGTGATAAGCGCATCATCGTCATTAAGCAGCCTGTGGGGGTTGTGGCATCTATCACTCCCTGGAAC TTTCCCAATGCCATGATCGCACGTAAAGCGGCGGCGGCATTAGCGGCAGGTTGTACTTTTGTGGTTCGCCCTTCACCACT GACGCCACTGTCGGCGCTTGCCATGGCAGAGTTGGCCGAGCGGGCGGGGATCCCGGCCGGTGTATTAAATGTCGTGGTGG GTGAAGATGCCGTAGGCATGGGAGAAGTGCTGACGCAACATCCCGATGTTTCAAAGTTTACCTTTACTGGCTCGACGGCC GTGGGCAAGATTTTGATGACGCAGAGCGCGACGACTGTGAAGAAGGTCTCCATGGAGCTGGGTGGTAATGCCCCCTTCAT CGTCTTCGATGACGCGGACATCGACGCTGCCGTGCAGGGAGCACTCGTCTCTAAGTATCGTAATGCCGGCCAGACATGTG TCTGTACTAATCGTATCTATCTCCAAAAAGGTATTGCTAAGGAGTTTACCGATAAATTTGCCACTGCGGTTGCGAACCTG ACATTGGGAGATGGACTCAGTGAAGGGGTGACTATTGGCCCGATGATCTCATCGACAGCGGTGGATAACGTCAGCAAATT GGTCGCAGACACACTCGCCCAGGGCGGCAAATTGTTAACCGGTGGTCAGCGTAGCGAAGTGGGGGCTAACTTCTTCGAAC CGACAATTGTCACCGGAGTCACCAATGAGATGTCATTGGCACGTAATGAGATATTTGGCCCCGTGACGCCGATCATCAGC TTCGATAACGAAGAGGAGGCGATCGCCATGGCCAACGATACCGAATATGGACTGGCGGCGTATTTCTATTCCCGCGATAT TGGCCGAATCTGGCGAGTCGGTGAGGGGCTCGAATTTGGCATGGTGGGAGTAAACGAGGGCATTATCTCGAATGCCGCAG CGCCATTTGGCGGAGTAAAGCAATCGGGGAATGGTCGTGAAGGCTCTAAGTATGGTCTCGACGATTATCTGGAGATCAAA TACCTGTGCATGGGTGGCTTGGACAGGTAA Protein sequence : MQDLKDPSLVKLSSYIDGRWSEAGIASSVTFEVTNPANDSVVANVLNAGIDETEAAVLAAKRALPAWSKKSANERAAILR AWFNLMMANQDDLGRILTLEQGKPLAEAKGEIGYGAAFIEWFAEEGKRVYGDTIPAPSGDKRIIVIKQPVGVVASITPWN FPNAMIARKAAAALAAGCTFVVRPSPLTPLSALAMAELAERAGIPAGVLNVVVGEDAVGMGEVLTQHPDVSKFTFTGSTA VGKILMTQSATTVKKVSMELGGNAPFIVFDDADIDAAVQGALVSKYRNAGQTCVCTNRIYLQKGIAKEFTDKFATAVANL TLGDGLSEGVTIGPMISSTAVDNVSKLVADTLAQGGKLLTGGQRSEVGANFFEPTIVTGVTNEMSLARNEIFGPVTPIIS FDNEEEAIAMANDTEYGLAAYFYSRDIGRIWRVGEGLEFGMVGVNEGIISNAAAPFGGVKQSGNGREGSKYGLDDYLEIK YLCMGGLDR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 7e-128 | 60 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-75 | 41 |
