Gene Information

Name : Ssed_3899 (Ssed_3899)
Accession : YP_001475631.1
Strain : Shewanella sediminis HAW-EB3
Genome accession: NC_009831
Putative virulence/resistance : Unknown
Product : TraR/DksA family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG1734
EC number : -
Position : 4768847 - 4769290 bp
Length : 444 bp
Strand : +
Note : KEGG: shw:Sputw3181_0815 transcriptional regulator, TraR/DksA family

DNA sequence :
ATGCCAGAAGGCACTAAAAAACTCGGCGTGCTCGCTATCGCAGGTGTAGAACCTTACCAGGAAAAGCCTGGTGAGGAGTA
TATGAACGCAGATCAGCTGGACCACTTCAGAACGATTCTGGACTCTTGGCGTAATCAATTGCGTGAAGAGGTCGATCGTA
CTCTTAACCATATGCAAGATGAAGCGGCTAACTTCCCGGATCCTGTAGACCGTGCAGCACAGGAAGAGGAGTTCAGTCTT
GAGCTTCGTGCTCGTGACAGAGAGCGCAAGCTGATTAAGAAGATCGAAAAGACACTTCAGAAGATTGAAGAAGATGATTT
CGGATTCTGTGAATCTTGTGGCATCGAAATCGGCATCCGCCGCCTCGAAGCTCGTCCAACAGCCGATCAGTGTATCGACT
GTAAGACACTTGCAGAGATCAAAGAAAAGCAGATGGCTGGCTAA

Protein sequence :
MPEGTKKLGVLAIAGVEPYQEKPGEEYMNADQLDHFRTILDSWRNQLREEVDRTLNHMQDEAANFPDPVDRAAQEEEFSL
ELRARDRERKLIKKIEKTLQKIEEDDFGFCESCGIEIGIRRLEARPTADQCIDCKTLAEIKEKQMAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00318 YP_008211644.1 DnaK suppressor protein Not tested AbaR26 Protein 2e-45 68
BJAB07104_00314 YP_008207779.1 DnaK suppressor protein Not tested AbaR25 Protein 2e-45 68