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Name : Ssed_3821 (Ssed_3821) Accession : YP_001475553.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : potassium/proton antiporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG3263 EC number : - Position : 4653466 - 4655190 bp Length : 1725 bp Strand : - Note : the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli DNA sequence : GTGAGCGCTGAAACAATTAATAATTTTTTTCTTATCGGTGCGCTGTTAATTGCAGTGAGTGTACTTTTGAGTGCGGTTTC TTCTCGTGTCGGTATTCCTATCCTGTTAGTCTTTCTCGGTGTAGGTATTATGGCTGGAGAAGACGGCCCCGGTGGGATAC ATTTCGATGACTATTCCGTTGCTTACCTGGTCAGCAACTTAGCCCTGGCCGTTATTTTGCTCGATGGCGGTATGCGCACT CGCGTCTCCAGTTTCAGGGTGGCCCTGTGGCCGGCACTCTCCTTAGCCACATTTGGCGTGGCTATTACGACGGGCCTGAC GGGAATGATGGCCGCCTACTTGTTTGACCTCAATATTCTTCAGGGGCTATTGGTGGGGGCTATCGTGGGCTCTACTGATG CGGCAGCCGTATTTTCATTGCTTAAAGGCAAGCGTCTGAACGAACGTGTGGGTGCGACATTAGAGATAGAGTCCGGCAGT AACGATCCCATGGCTGTTTTTCTGACTGTGACCTTAATAGCCATACTCGCTAGTGTAGGTGAAGGAGTGTCGGCTAGCTT CATGGTGATGAGTTTCATCAAGCAGTTTGGCTTAGGGGCGTGTCTGGGCTTAGGTGGAGGCTGGTTGTTATGGCAATTAA TCAATCGAATTCAGCTGGCCGACGGCTTATATCCAGTCTTAGTGCTCAGTGGCGGCTTAATCGTGTTTGCTATCTCAAAT AGCCTGGGCGGTAGCGGCATCTTGTCTATCTACCTGTTGGGATTACTATTGGGGAACCGTGCGATGCAGGGCCGACATAC CATCTTGAGTGTGCTCGATGGCATGACCTGGCTGAGTCAGATTGGCATGTTCCTGGTCTTAGGCTTGCTCTTGACCCCAT CAGATCTGACTGAGGTAGCGATTCCTGCACTGGCGTTGGCATTTGGTATGATCTTGTTTGCCAGGCCCATTTCCGTGTGG CTGAGCCTGTTGCCATTTAAGAGTTTCAGTAGTCGGGACCGTTGGTTCATCTCCTGGGTCGGGCTGCGAGGTGCCGTACC GATTATTTTAGCGGTATTTCCTATGATGGCGGGTCTTCCCAATGCCCAGCTTTATTTCAATGTTGCCTTCTTTGTAGTCT TGGTCTCTCTGTTGGTTCAGGGCTGCTCTTTAGGCAGGGCTGCGAGACTCGCTAAGGTAGAACTGCCAACCAAACCTAGC CCTATCTCCAGATCTGGCGTGGCCATCTACCCTAAGAGTGACTGGGAGCTTTTTGTTTACCACCTCAGCGAACATAAGTG GTGTGTGGGGGAGCCTATTCGCAGGCTCAACATGCCTGCGGGAACACACATTGCCGCCCTGTACCGTGGCAAGGATATGT TGCACCCCTCGGGAAGCACTAAGCTGCAAACGGGAGATATCTTGTGTGTACTGGGGCATGAAAAAGATCTCGATGCCTTG GGAACCCTGTTCAGTGAAGCGCCAATGCAGGAGGAGTTACCGCGCTTCTTCGGTGACTTCTTTCTCGATGTCGATATTCA ATTAGCCAGCCTGGCCCCGATATACGGACTCGAACTCGATGATGAGGCGCAATATCTGTCTGTTGGAGAATTGTTGGTTA AACATTTGGGGGATGAGTTGGTGCTTGGGGATCAGTTCGAATGGCAATCGCTGAGTTGGGTTGTCTCTGAGCTGAGTCAG GGAGAGGTTGTTAAGGTTGGTATACGGTTACCCAATGATTCATAA Protein sequence : MSAETINNFFLIGALLIAVSVLLSAVSSRVGIPILLVFLGVGIMAGEDGPGGIHFDDYSVAYLVSNLALAVILLDGGMRT RVSSFRVALWPALSLATFGVAITTGLTGMMAAYLFDLNILQGLLVGAIVGSTDAAAVFSLLKGKRLNERVGATLEIESGS NDPMAVFLTVTLIAILASVGEGVSASFMVMSFIKQFGLGACLGLGGGWLLWQLINRIQLADGLYPVLVLSGGLIVFAISN SLGGSGILSIYLLGLLLGNRAMQGRHTILSVLDGMTWLSQIGMFLVLGLLLTPSDLTEVAIPALALAFGMILFARPISVW LSLLPFKSFSSRDRWFISWVGLRGAVPIILAVFPMMAGLPNAQLYFNVAFFVVLVSLLVQGCSLGRAARLAKVELPTKPS PISRSGVAIYPKSDWELFVYHLSEHKWCVGEPIRRLNMPAGTHIAALYRGKDMLHPSGSTKLQTGDILCVLGHEKDLDAL GTLFSEAPMQEELPRFFGDFFLDVDIQLASLAPIYGLELDDEAQYLSVGELLVKHLGDELVLGDQFEWQSLSWVVSELSQ GEVVKVGIRLPNDS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| f536 | AAC61706.1 | F536 | Not tested | PAI I CFT073 | Protein | 5e-121 | 61 |
| unnamed | AAB61290.1 | unknown | Not tested | PAI I CFT073 | Protein | 5e-121 | 61 |
