|
Name : Ssed_3722 (Ssed_3722) Accession : YP_001475454.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Resistance Product : ABC transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG1136 EC number : - Position : 4529404 - 4530195 bp Length : 792 bp Strand : - Note : KEGG: shn:Shewana3_3260 ABC transporter related DNA sequence : ATGTTATCGATGAAGAATATCAGCAAAGTATTTAAAACAGATCTGGTGGAAACTCATGCGCTGCGTGAATTTAATCTGGA GGTTAACGAAGGCGAATTTGTGGCGGTTACCGGCCCATCTGGCTCGGGTAAAACTACCTTCCTCAATATTGCAGGTTTGC TCGAAGGCTTTACCCTGGGTGATTACTTTCTCGATGGCGTGAATATCTCAAACCTGAGCGATAACAAGAGCGCGGCTATT CGTAATGAGAAAATAGGCTTTATCTTCCAGGGTTTCAACCTGATACCGGATCTGAATCTGGCCGAAAATGTGGAAGTGCC GCTGCGATATCGTGGCTTCAGCGCCAAAGAGCGTAAGCGCCGTGTACAGCAGGCGCTGGAGCAGGTTGGCCTTGCCGCCC GTATGAAGCACCTTCCCTCTCAGCTTTCCGGTGGTCAGCAGCAGCGCGTCGCGATTGCCCGTGCCTTAGCCGGAGAGCCA AGATTCCTCCTTGCCGATGAGCCAACGGGTAACCTCGACAGCATGATGGCGCGTCAGGTGATGGAGCTGTTAGAGAAGAT TAACAAGGCGGGGACCACGATTATCATGGTGACTCACGACCCGGAACTTGCCCGCCGTGCTCAACGAAATATTCAGATTG TCGATGGCCAGGTATGTGATTTTACTATGTATCAGGGAGGTGAGGGGTACCAAAGTGGAGAAGGGCACCAAGGTGGCGAG CGCACCAGCGAAAAGCCGCACCTGGTGACAGAGTCTAGAGCGTCTGTGAATCAAGATAAAGTAGCGAGCTAA Protein sequence : MLSMKNISKVFKTDLVETHALREFNLEVNEGEFVAVTGPSGSGKTTFLNIAGLLEGFTLGDYFLDGVNISNLSDNKSAAI RNEKIGFIFQGFNLIPDLNLAENVEVPLRYRGFSAKERKRRVQQALEQVGLAARMKHLPSQLSGGQQQRVAIARALAGEP RFLLADEPTGNLDSMMARQVMELLEKINKAGTTIIMVTHDPELARRAQRNIQIVDGQVCDFTMYQGGEGYQSGEGHQGGE RTSEKPHLVTESRASVNQDKVAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Cp1002_1464 | YP_005681730.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 2e-34 | 43 |
| CpC231_1466 | YP_005683828.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 2e-34 | 42 |
| cpfrc_01473 | YP_003783873.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 2e-34 | 42 |
| CpI19_1473 | YP_005685914.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 2e-34 | 42 |
| cur_1502 | YP_001800896.1 | cell division ATP-binding protein FtsE | Not tested | Not named | Protein | 2e-30 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ssed_3722 | YP_001475454.1 | ABC transporter | NC_012469.1.7686878. | Protein | 2e-52 | 50 |
| Ssed_3722 | YP_001475454.1 | ABC transporter | NC_008702.1.4606598. | Protein | 5e-45 | 50 |
| Ssed_3722 | YP_001475454.1 | ABC transporter | CP001581.1.gene798.p | Protein | 5e-38 | 47 |
| Ssed_3722 | YP_001475454.1 | ABC transporter | CP001581.1.gene598.p | Protein | 9e-31 | 41 |
