Gene Information

Name : Ssed_3534 (Ssed_3534)
Accession : YP_001475266.1
Strain : Shewanella sediminis HAW-EB3
Genome accession: NC_009831
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-ACP reductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 4306272 - 4307006 bp
Length : 735 bp
Strand : -
Note : KEGG: ppr:PBPRB1562 hypothetical 3-oxoacyl-(acyl carrier protein) reductase

DNA sequence :
ATGCTGGCTAACAAAGTTTGTATTGTAACAGGCGGGGCGCAGGGAATTGGGCGTTGTATCGTTGAAACATTTGCGAAGCA
GGGAGCATTAAAAGTCTATGCCTGCGATATGAATCATGAAGCGATGGTAGATCTGGAAACTCAGTACAGTAATGTTTGTG
CTAAACAGCTTAATGTTTGCGATAGGGATGCTATCAAGATGCTGGTGGCAGAATTGAAAGAGGTACATGGCAATATCGAT
GTCTTGGTTAACAATGCCGGTATCACACGGGATAATCTTCTGGACAGGATGAGTGAAGATGACTGGGATATGGTGGTCAA
TGTCAACTTGAAGGGCGTCTTCAATATGACTCAGGCGGTTTCACCTGTGATGATTGAAAGTGGTGTCGGTTCAATCATAA
CCATGTCATCGGTCGTCGGTACCGACGGCAACGTTGGTCAGAGTAACTATGCCGCGACTAAAGGCGGTGTGATCACTATG
ACTAAGGGCTGGGCAAAAGAGTTTGCTCGTAAAGGTGCTCAGGTTCGCGCGAACTGCGTCGCGCCCGGCTTTATCGAAAC
CCCAATGACCATTGAACTTCCGGAAAAAGTACTCGATTACATGAAAGGGAAGACACCACTGGGGCGTATGGGTAAGCCTC
AGGATATCGCCGATGGCGTGCTGTTCCTCGCCAGCGATCAGGCCAGTTTTATTACCGGACAAACACTAAAAATTGATGGC
GGCTTAGTGATCTAG

Protein sequence :
MLANKVCIVTGGAQGIGRCIVETFAKQGALKVYACDMNHEAMVDLETQYSNVCAKQLNVCDRDAIKMLVAELKEVHGNID
VLVNNAGITRDNLLDRMSEDDWDMVVNVNLKGVFNMTQAVSPVMIESGVGSIITMSSVVGTDGNVGQSNYAATKGGVITM
TKGWAKEFARKGAQVRANCVAPGFIETPMTIELPEKVLDYMKGKTPLGRMGKPQDIADGVLFLASDQASFITGQTLKIDG
GLVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 7e-31 43
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 3e-30 43
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 3e-30 43
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 6e-31 42
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 4e-30 42