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Name : leuS (Ssed_3479) Accession : YP_001475211.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : leucyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0495 EC number : - Position : 4236355 - 4238946 bp Length : 2592 bp Strand : + Note : leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl DNA sequence : ATGCAAGAGCAATATAAACCTTCAGAAATTGAAGCTAAAGTGCAGCAGCACTGGCAAGACAAAAAAACATTTGAAGTCAC CGAAGACGAAAACAAAGAGAAATTCTACTGTCTCTCTATGTTTCCTTACCCTTCTGGCCGGCTACACATGGGTCATGTTC GTAACTACACCATAGGTGACGTTGTCGCTCGTTACCAGCGACTTCAGGGAAAAAATGTATTACAGCCTATAGGTTGGGAC TCATTTGGTCTTCCTGCTGAAAACGCTGCGATTAAAAACAACACAGCCCCGGCGCCTTGGACATACGAAAACATCGATTA CATGAAAAACCAGCTGAAAATGCTGGGTTTCGGTTATGACTGGAGCCGTGAGATCGCAACCTGTACCCCTGAGTATTATC GTTGGGAGCAGTGGTTTTTCACTAAGCTTTTTGAAAAAGGCTTAGTCTATAAGAAAACGGCTTCGGTCAACTGGTGTCCG AACGATGAAACCGTTTTGGCTAACGAACAGGTTATCGATGGTTGCTGCTGGCGTTGTGATACAACGGTAGAGCAAAAAGA GATCCCACAGTGGTTTATCAAGATCACTGAGTATGCAGACGAACTCCTTAAAGATATCGATCAGTTAGACGAATGGCCTG AGCAAGTTAAGACCATGCAACGTAACTGGATTGGACGCAGCGAAGGCATCGAGATGACTTTCGGCGTTGTCGATAGCGAA GAGACATTCGATATCTACACCACGCGTCCGGATACTGTAATGGGTGTAACTTATGTTGCCATTGCAGCAGGTCACCCGCT TGCAGAAAAAGCAGCAGCAAACAACTCAGAGCTTTCCGACTTTATCGAAGAGTGTAAAAACGCCGATACTACCGAAGCCG CTATGGCTGCGATGGAAAAGAAAGGTGTTGCTACTGGTCTGTATGCCACTCATCCACTAACCGGTAAGCAAGTACCTATC TGGGCCGCTAACTTCGTATTGATGAACTACGGTACAGGCGCTGTAATGTCAGTCCCAGCTCACGATCAACGTGATTATGA GTTTGCGACTAAATACGGCTTAGCTATCGAAGGCGTTATTAAGCCAAGCGATAGCGACTTAGACATCAGCGAAGAAGCTT ACACAGAAAAGGGCGTATTGTTTAACTCAGGCGACTCTTTTCCCGAGCTGGATGGCCTGGACTTCCAAGACGCTTTTGAT GCCATCGATGCCAAGCTATCGAGTGAAGGCAAGGGTAAGCGTCAGGTAAACTTCCGTTTACGCGACTGGGGTGTCTCCCG TCAGCGTTATTGGGGGGCACCTATCCCTATGGTCACGCTTGCTGACGGTACAGTCGTTCCTACACCGGAAGATCAACTGC CTGTCATTTTGCCTGAAGATGTGGTCATGGATGGAATCCAAAGCCCAATCAAGGCTGACAAAGAGTGGGCTAAAACTCAG ATTAATGGCCAGGAAGCGTTCAGAGAGACAGATACCTTCGACACTTTTATGGAGTCATCTTGGTATTATGCGCGTTACTG TAGTCCACATGCCGATGAGATGTTAGACCCGGCTAAGGCTAACTACTGGCTGCCGGTAGATCAGTATATCGGTGGTATTG AGCATGCGTGTATGCATCTGCTTTACTTCCGTTTCTTCCATAAATTACTGCGTGATATTGGTTTAGTTAACTCTGATGAG CCAGCGAAGCGTCTATTGACTCAAGGTATGGTATTGGCCGATGCTTTCTACTATAACAACGAGAAAGGCGCGCGGGTTTG GGTTGCTCCGTCAGATGTGACCGTTCAGGAAACTGACGAGAAAGGCCGCATCCAAAAAGCCGTTGACAGCGAAGGTCATG AGCTTGTCTATACCGGTATGAGCAAGATGTCTAAGTCTAAAAACAACGGCATTGATCCTCAAGTGATGGTAGATAAGTAC GGCGCCGACACCGTGCGTCTGTTTATGATGTTTGCCGCGCCACCTGAGCTGACGCTTGAATGGCAAGAGTCGAGTGTTGA GGGTGCACATCGCTTTATTAAGCGTTTGTGGAAAGTCGCCCATGACCATGTTGCTAAAGGCGCCACTGCTCCGTTAGACG TTAAAACTCTCGATACTAAACAGAAAGAGCTACGTCGTGAACTGCACAAGACCATAGTTAAGGTCGGTGATGATATTGAA CGTCGCCAAATGTTCAATACAGCCATCGCCTCCGTGATGGAGCTGATGAATCGTCTTCAGAAAGCACCAACTGAAACTCA GCAAGACCGTGCTCTGATGCAAGAAGCACTTTCTGCAGTTGTCCGTCTGCTTTACCCTATCATTCCACACACTAGCTTTA GCCTGTGGAATGATCTTGGGAATGAAGAGAACATCGAAGATGTGCGTTGGCCTGAAGCCGATCAGTCTGCACTCGTTGAA GATAGCAAGCTAATTATCGTTCAAGTCAACGGTAAACTGCGTGCCAAGATCACCGTTCCAGCCGATGCGACTAAAGAGGT TGTTGAGGAACAAGGTTTTGCAGAAGAGGGTGTGATTAAACATACCGAAGGTAAAACCGTTCGCAAAGTTATCTATGTAC CGGGCAAATTGCTCAACATCGTGGCTAACTAG Protein sequence : MQEQYKPSEIEAKVQQHWQDKKTFEVTEDENKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARYQRLQGKNVLQPIGWD SFGLPAENAAIKNNTAPAPWTYENIDYMKNQLKMLGFGYDWSREIATCTPEYYRWEQWFFTKLFEKGLVYKKTASVNWCP NDETVLANEQVIDGCCWRCDTTVEQKEIPQWFIKITEYADELLKDIDQLDEWPEQVKTMQRNWIGRSEGIEMTFGVVDSE ETFDIYTTRPDTVMGVTYVAIAAGHPLAEKAAANNSELSDFIEECKNADTTEAAMAAMEKKGVATGLYATHPLTGKQVPI WAANFVLMNYGTGAVMSVPAHDQRDYEFATKYGLAIEGVIKPSDSDLDISEEAYTEKGVLFNSGDSFPELDGLDFQDAFD AIDAKLSSEGKGKRQVNFRLRDWGVSRQRYWGAPIPMVTLADGTVVPTPEDQLPVILPEDVVMDGIQSPIKADKEWAKTQ INGQEAFRETDTFDTFMESSWYYARYCSPHADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDIGLVNSDE PAKRLLTQGMVLADAFYYNNEKGARVWVAPSDVTVQETDEKGRIQKAVDSEGHELVYTGMSKMSKSKNNGIDPQVMVDKY GADTVRLFMMFAAPPELTLEWQESSVEGAHRFIKRLWKVAHDHVAKGATAPLDVKTLDTKQKELRRELHKTIVKVGDDIE RRQMFNTAIASVMELMNRLQKAPTETQQDRALMQEALSAVVRLLYPIIPHTSFSLWNDLGNEENIEDVRWPEADQSALVE DSKLIIVQVNGKLRAKITVPADATKEVVEEQGFAEEGVIKHTEGKTVRKVIYVPGKLLNIVAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| leuS | YP_281511.2 | leucyl-tRNA synthetase | Not tested | Not named | Protein | 3e-154 | 41 |
