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Name : Ssed_3477 (Ssed_3477) Accession : YP_001475209.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : methyl-accepting chemotaxis protein Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 4233476 - 4235344 bp Length : 1869 bp Strand : - Note : KEGG: ppr:PBPRA1466 methyl-accepting chemotaxis protein DNA sequence : ATGAAGTTTGTACATAAGATTGTGATGGCTGTGAGTTTAATTTTGATGTTGTCCTTGGGTTGTCTGTCAGGATATCAATA TATTCAAATAAAACAGCAGATTAATGATCAGGTGAACAGTAGTGTTTCTGAGCTTGCCAGTTCGATGAACAGTAACATTC AAGCTGTCATGGCTGAAAAGGCGGATCTAACAGCCTATGCGGTTTCACTGTTACAGGAAGATCTATCAGATGAGCATTTC GTTGAAATATTAGGGCAAGCGGTAATAAAGAAACACTTTCTTTTGGCGGGTATGGGCCTGGAGAGTGGTCACTTTGTAGG AAACGATCCTAACTGGGATCCCGGCGCGAGTTATGACCCTCGTCAACGGATGTGGTACAAGGAAGCTAAAAGTAATAATA AACAATTGTTTACAGCACCTTATGCCGATGCTTCCAGCGGTGAGATAATGATATCTACCGCAGCCCCTTTATACGAAAAT GGTCAATTTAAAGGTGCACTTTTTACCGATGTCAGCCTTAAGAGTCTGGCAGAGATCAGTAATGAGGCGCACCTATTTGG TGCCGGTTATGCGTTTATAGTGGGTAACGATGGTGAGTTTATCGCGCATCCTGAGGCTGCACAGAATGGACGTGCGATGG ACCAATTTTTTGGTGAGCGCTTGGATACTAGCAAGGAGTTTGGTGAAGTAGAGATTGATGGACAGATGCATGCAGTGATC TTCAGTCCTCTATCGGGTCTGGGCTGGACTCTGGGCATTGTTTTGGATGAAAGCATTATTTATGCTGCCGCCGATGAACT TAGAAATGCAGCGATTCTGTATTCAGTGTTGTCACTTATCATAGCGATAATAGTCATGAGCGGAATTATCAGTCGTTTGA TGAGACCTCTGGAAGTGTTAAATGAAGCTATGGCCGATGTCGCAACGGGAGAGGGAGATCTTACCCGTCGTTTGAGTACA GATTCTGATGTCGAATTTGCCACCCTGGCCGGCAACTTCAACAATTTTGCTATCAAGCTGCAGGAACTAATCCAGCAAGT TAAGTTGATCGGAGGGGAGGTCAGCCTAGGTACCGAAACCACGGCGAGAGGGGCCAGTGAAGTGACGCACTCGATGAGTT TGCAAACCCAAGAGGTTGAACAGTTAGCCACTGCGATGCATGAGATGGCGACAACGGCTTCAGATGTGGCCAATAATGCT CAAGGTGCGGCTTATGCGGTTCAACAAGCCGATAATGCCGTGAGCGATGGTGCCTCGGCCGTGCTGCAGACAACTGAGTC TATCGAGCATCTCTCTCAGCAGATTGAAGAGGCTGTGGTGGTCGTTAAAGAGCTGGAAACGGATACAGTGAGTATCGAGT CAATACTCGGCGTCATTAATGAGATCGCGGGTCAAACTAATTTGCTGGCACTTAACGCGGCAATCGAAGCCGCAAGGGCC GGTGAGTCGGGAAGAGGCTTTGCCGTCGTTGCCGATGAGGTTCGTAGCCTAGCCGCACGTACTACGGAGTCGACTTCAGA AATTAAAGAGAAAATTGAGAAGTTGCAGTCTGGTGTGGCCGCCGTTGTAAATGTAATGGATGAAAGCCGTACAACAACGG TCACAACCGTTGAAAAAGCCAAAGCTGCGAATGAAACCCTCAGCGAGATCCGTAAGAGTATCGAAGAGATAACCGATATG AACTTGCAGATTGCCAGTGCCGCAGAGGAGCAGAGCCAAGTAGCCGAGGAGATGAATAAGAACACCTCCAATATCAGAGA TCTGTCGATGCAGGTTTCAGATAGTACCGAGCAGACAAATCAGGCGATGAGTGCGCAGTTGGATCATGTTAAGCAACAAG AGGAACTATTGAATCAGTTTATCGTGTAA Protein sequence : MKFVHKIVMAVSLILMLSLGCLSGYQYIQIKQQINDQVNSSVSELASSMNSNIQAVMAEKADLTAYAVSLLQEDLSDEHF VEILGQAVIKKHFLLAGMGLESGHFVGNDPNWDPGASYDPRQRMWYKEAKSNNKQLFTAPYADASSGEIMISTAAPLYEN GQFKGALFTDVSLKSLAEISNEAHLFGAGYAFIVGNDGEFIAHPEAAQNGRAMDQFFGERLDTSKEFGEVEIDGQMHAVI FSPLSGLGWTLGIVLDESIIYAAADELRNAAILYSVLSLIIAIIVMSGIISRLMRPLEVLNEAMADVATGEGDLTRRLST DSDVEFATLAGNFNNFAIKLQELIQQVKLIGGEVSLGTETTARGASEVTHSMSLQTQEVEQLATAMHEMATTASDVANNA QGAAYAVQQADNAVSDGASAVLQTTESIEHLSQQIEEAVVVVKELETDTVSIESILGVINEIAGQTNLLALNAAIEAARA GESGRGFAVVADEVRSLAARTTESTSEIKEKIEKLQSGVAAVVNVMDESRTTTVTTVEKAKAANETLSEIRKSIEEITDM NLQIASAAEEQSQVAEEMNKNTSNIRDLSMQVSDSTEQTNQAMSAQLDHVKQQEELLNQFIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0514 | NP_230165.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 7e-79 | 43 |
