Gene Information

Name : Ssed_3380 (Ssed_3380)
Accession : YP_001475112.1
Strain : Shewanella sediminis HAW-EB3
Genome accession: NC_009831
Putative virulence/resistance : Unknown
Product : nucleoside transporter
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG1972
EC number : -
Position : 4117453 - 4118712 bp
Length : 1260 bp
Strand : -
Note : KEGG: shw:Sputw3181_1187 nucleoside transporter

DNA sequence :
ATGGATATTTTAATGAGTTTGGTAGGGGTGGTCACCCTACTTGCGATAGCGTTCGGGTTATCGAATAATAGAAAAGCAAT
TAACAAGCGTACCGTTTTTGGTGCATTAGCAATTCAGGCCGCTTTCGGTGGTTTCGTTTTATATGTTCCAGTCGGTAAAG
ATATTCTAAAGACTATTTCAGATGGCGTGTCTAGCGTTATCGGTTATGCTCAAAACGGTATCGGTTTCTTGTTCGGTGAT
TTGGCTAACTTTAAAGTTGGTTTCATTTTCGCCATCAACGTTTTACCAGTCATTGTTTTCTTCTCTTCTCTTATTGCTGT
TCTTTATTACCTTGGCGTAATGCAGTGGATTATCCGTATTATCGGTGGTGCACTACAGAAAGCTCTTGGTACAAGCCGTA
CAGAGTCTATGTCAGCAACAGCTAACATCTTCGTTGGTCAAACTGAAGCACCACTAGTTGTACGTCCGTTTATCGCGACT
ATGACTAACTCTGAGCTATTTGCCATCATGGTAGGTGGTTTAGCGTCTATTGCTGGTTCAGTAATGGCCGGTTATGCGCA
GATGGGTGTACCAATCGAATATCTAGTTGCCGCTTCATTCATGGCAGCACCAGGTGGTCTATTAATGGCTAAGCTGATGC
ACCCTGAAACTGAAGAAGCTAAGAACGATATGGAAGACCTTCCAGAAGACCCTGATAAGCCAGCTAACGTTATCGACGCT
GCTGCTGCAGGTGCTTCTTCAGGTATGCATCTAGCACTTAACGTTGGTGCAATGCTTCTAGCGTTCGTTGGTTTGATTGC
TATGATGAACGGCATTATCGGTGGTCTTGGCGGACTAGTCGGTATGGAAGGTCTAACTCTTGAATTGATTCTTGGTTATA
TCTTCATGCCTCTTGCATTCCTTATCGGTGTGCCTTGGAGCGAAGCACTCGTTGCCGGTTCTTTCATTGGTCAGAAGATT
GTTGTTAACGAATTCGTTGCCTACTTGAACTTCGCTCCATACATGAAAGATATCGCTGATGGCGGCATGGTAGTTGCTGA
AACAGGTCTTGCTATGACAGATAGAACAAAAGCGATTATCTCTTTTGCTCTTTGTGGCTTCGCTAACCTATCTTCAATCG
CGATTCTTCTCGGTGGTCTAGGTGCTATGGCGCCAACTCGTCGTCACGACTTAGCTAAGCTAGGTATGCGTGCAGTAGTT
GCAGGTTCTCTTGCTAACTTGATGAGTGCGACACTAGCGGGTCTATTCCTGGCACTATAA

Protein sequence :
MDILMSLVGVVTLLAIAFGLSNNRKAINKRTVFGALAIQAAFGGFVLYVPVGKDILKTISDGVSSVIGYAQNGIGFLFGD
LANFKVGFIFAINVLPVIVFFSSLIAVLYYLGVMQWIIRIIGGALQKALGTSRTESMSATANIFVGQTEAPLVVRPFIAT
MTNSELFAIMVGGLASIAGSVMAGYAQMGVPIEYLVAASFMAAPGGLLMAKLMHPETEEAKNDMEDLPEDPDKPANVIDA
AAAGASSGMHLALNVGAMLLAFVGLIAMMNGIIGGLGGLVGMEGLTLELILGYIFMPLAFLIGVPWSEALVAGSFIGQKI
VVNEFVAYLNFAPYMKDIADGGMVVAETGLAMTDRTKAIISFALCGFANLSSIAILLGGLGAMAPTRRHDLAKLGMRAVV
AGSLANLMSATLAGLFLAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yutK YP_005163383.1 putative sodium/nucleoside cotransporter Not tested Not named Protein 1e-63 46