|
Name : rdgC (Ssed_3306) Accession : YP_001475038.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : recombination associated protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2974 EC number : - Position : 4018647 - 4019558 bp Length : 912 bp Strand : + Note : Required for efficient pilin antigenic variation DNA sequence : ATGTGGTTTAAAAATCTGACTGTTTACCGTTTTAATAAACCTTTCTCTGTTGATACAGAAGCTCTTGAAAAGTCATTGGA AGACTTCACATTCTCTCCATGCTCAAGCCAAGACATCAGCAAGTTCGGTTTTTCCAATGCACTTGGAAAACAAGGCCAAA CACTGGTACACAGTGCCAGTGAAAGACACCTTATCTGTGCAACAAAGGAAGAGAAGATCCTTCCTTCACAGGTGATAAAA GAAGCACTCGAAGATAAAGTTGCTCAAATTGAAGCCGAGGAAGATCGCAAACTGGCAAAGAAAGAGAAAGATGCAATGAA AGAGGAGATCGTCATGACTCTGCTTCCTCGTGCATTCACTCGCCGCAGTCAGATCCGCGCACTGATCATTCCGGAAATTG AGATGATTCTCGTCGATAGCTCAAGTGCTGCTAAGTCAGAAGAGTTACTGGCTCTGCTACGTAAAGCCCTGGGCTCACTT CCTATCATTCCGTTAAGTTTTAAGACCCCAATCGAGACTCAGTTAACCGAATGGTTAAAAGGAAACTCGACTCCGGCTCC TTTTATCATGCAGGATGAAGCCGAACTTAAAACTGACTCCGATGAGGGCGGCATCGTTCGCTTTAAGCAACAAGACCTCA CCGAAGATGAAGTGCTCGCTCACATTGAAGTGGGTAAGCAGGTTCACAAGCTGGCTCTGTATTTCGGCCAGTCTATCGCC TTCCTGCTGCAGTCTGATGCCGGGATTAAACGTTTAAAGTTCTCTGAAGAGTTCAGAGCGGGCAACGATGAGGTCGGCAC TGAAGATCCTATGGCGCGCTTAGATGCAGACTTTGCCTTAATGGGCAGTGAGCTTATCGCCTTGATGAACTCATTAGTCG AAGTGCTCGGCGGTGTAGAAGACAGCATTTAA Protein sequence : MWFKNLTVYRFNKPFSVDTEALEKSLEDFTFSPCSSQDISKFGFSNALGKQGQTLVHSASERHLICATKEEKILPSQVIK EALEDKVAQIEAEEDRKLAKKEKDAMKEEIVMTLLPRAFTRRSQIRALIIPEIEMILVDSSSAAKSEELLALLRKALGSL PIIPLSFKTPIETQLTEWLKGNSTPAPFIMQDEAELKTDSDEGGIVRFKQQDLTEDEVLAHIEVGKQVHKLALYFGQSIA FLLQSDAGIKRLKFSEEFRAGNDEVGTEDPMARLDADFALMGSELIALMNSLVEVLGGVEDSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ESA_00998 | YP_001437103.1 | hypothetical protein | Not tested | Not named | Protein | 2e-60 | 45 |
