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Name : Ssed_2973 (Ssed_2973) Accession : YP_001474708.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Virulence Product : UDP-glucose/GDP-mannose dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 3601422 - 3602693 bp Length : 1272 bp Strand : - Note : KEGG: saz:Sama_2260 UDP-glucose/GDP-mannose dehydrogenase DNA sequence : ATGTTTAAACAATCTAAAATAGCTATTATTGGCCTTGGTTATGTAGGCTTACCTCTAGCGGTAGAGTTTGGCAAACACTA CCCTACTATGGGCTTCGATATCAACAGCTCTCGTGTTGATGAATTAGTATCGGGTGTAGATAATACCCTTGAAGTTGAAA GCGAAGAGTTGCTAGAGGCCAAGCATTTAACTTATACCTGCGAGCTACAGGATATTAAAGATCACAATATCTATATTGTT ACTGTTCCTACGCCAATCGATGAGAATAATGCCCCTGATTTGACACCGCTTGTTAAAGCATCTGAAGCCCTCGGTAAAGT TATCAGCCAAGGTGATATTGTCATCTATGAGTCAACTGTATACCCAGGTGCGACGGAAGAGGTATGTATTCCTCTTATAG AGAAGATCTCCGGTCTTAAGTTTAATGAGGACTTCTTTGCTGGCTATAGTCCTGAGCGTATTAATCCGGGTGACAAAATA AACCGTCTGACGACGATTATGAAGATAACTTCCGGTTCGACACCTGAGATCGCCGAGTTTGTAGACCAACTCTACTCTTC GATCATCACTGCGGGAACCCATAAAGCCTCTTCGATTAAAGTGGCTGAAGCCGCAAAAGTCATTGAGAATACTCAGCGCG ATCTTAATATCGCCATCATCAATGAGTTTGCAAAGATCTTTAACCGCTTAGATATCGACACAGAAGAGGTGTTGAAAGCT GCCGGTACTAAGTGGAACTTCTTGCACTTCAAACCAGGGCTAGTCGGTGGTCACTGCATCAGTGTGGATCCTTACTATCT AACCCATAAAGCAAAGGAAGTTGGCTATATTCCTGAAGTGATCTTAGCGGGTCGACGTATCAATGATGGTATGGGCGCTT ATGTTTCAACCCAGATGGTTAAGAAGCTTTCAAGTAAGAAGATCCATATCGACGAAGCTAAAGTCTTGGTTTTAGGTTTT ACCTTTAAAGGCGACTGCCCTGATGTACGCAACACTAAGATCATCGATGTCGTAAATGAGTTGAAGAGCTTTAACATCTC TGTCGATGTGTATGATGGTTGGGCCGATCCTGCGGAAGTTAAGCATGAATATGGCTTATCACTGATCTCTGAATTAAAAC CAAATGAATATGATGGTATCGTGCTTGCTGTCGATCATAGCGAGTTTAAAGAGATGGGTATCGAGAAAGTTCGTGAGCTT GGTAAAGAAAATCACGTCGTTTACGACGTTAAGTATGTTTTCGAAACAACTGATTCAGATTTGAGGCTGTAA Protein sequence : MFKQSKIAIIGLGYVGLPLAVEFGKHYPTMGFDINSSRVDELVSGVDNTLEVESEELLEAKHLTYTCELQDIKDHNIYIV TVPTPIDENNAPDLTPLVKASEALGKVISQGDIVIYESTVYPGATEEVCIPLIEKISGLKFNEDFFAGYSPERINPGDKI NRLTTIMKITSGSTPEIAEFVDQLYSSIITAGTHKASSIKVAEAAKVIENTQRDLNIAIINEFAKIFNRLDIDTEEVLKA AGTKWNFLHFKPGLVGGHCISVDPYYLTHKAKEVGYIPEVILAGRRINDGMGAYVSTQMVKKLSSKKIHIDEAKVLVLGF TFKGDCPDVRNTKIIDVVNELKSFNISVDVYDGWADPAEVKHEYGLSLISELKPNEYDGIVLAVDHSEFKEMGIEKVREL GKENHVVYDVKYVFETTDSDLRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-135 | 63 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-135 | 63 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 9e-108 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ssed_2973 | YP_001474708.1 | UDP-glucose/GDP-mannose dehydrogenase | VFG0431 | Protein | 1e-135 | 63 |
