Gene Information

Name : Ssed_2624 (Ssed_2624)
Accession : YP_001474359.1
Strain : Shewanella sediminis HAW-EB3
Genome accession: NC_009831
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-ACP reductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 3176303 - 3177049 bp
Length : 747 bp
Strand : -
Note : KEGG: slo:Shew_1603 3-oxoacyl-(acyl-carrier-protein) reductase

DNA sequence :
ATGAGTGTAAGTATAGATTTAACAGGCAAAGTGGCGCTTGTTACAGGTGCAAGCCGTGGAATTGGCCGTGCTGTTGCTGA
AACGCTGGTTGCTGCAGGTGCGACAGTGGTAGGGACTGCAACGAGCGAACGTGGCGCTGCTGCTATTCAGGAATATTTGG
GTGACAATGGTTTAGGCTTAGTCCTCAATGTTACCGATAGCCAGTCTGTTACGGATCTTTTTGCTCAGATAAAAGAAAAA
TCAGGTGATGTCAGTATTTTGGTTAACAATGCCGGCATTACTCGTGATAATTTATTGATGCGTATGAAAGAAGATGAATG
GAGTGATATCATAGATACCAACCTTACATCTCTATTTCGTACCTCAAAGGCCGTTATGCGACCTATGATGAAAAAACGTA
ATGGTCGTATCATCAATATCGGCTCAGTCGTTGGTTCTATGGGAAATCCGGGACAAACGAATTACTGTGCTGCTAAGGCC
GGTTTAATCGGTTTTACAAAATCTCTTGCAAGAGAGGTTGCATCTCGTCAAATAACAGTGAATGCTATTGCTCCTGGATT
TATCCAGACAGATATGACTGATGAGCTGACGGAAGAGCAGCAACAAGGTATCATGTCTCAGGTTCCGATGGAGCGTTTAG
GTCAGGCACAAGAGATCGCTAATGCCGTGGTCTTCTTGGCTTCAGACTCCGCTGCATACATCACAGGAGAAACTCTCCAT
GTGAATGGTGGCATGTACATGGTTTAA

Protein sequence :
MSVSIDLTGKVALVTGASRGIGRAVAETLVAAGATVVGTATSERGAAAIQEYLGDNGLGLVLNVTDSQSVTDLFAQIKEK
SGDVSILVNNAGITRDNLLMRMKEDEWSDIIDTNLTSLFRTSKAVMRPMMKKRNGRIINIGSVVGSMGNPGQTNYCAAKA
GLIGFTKSLAREVASRQITVNAIAPGFIQTDMTDELTEEQQQGIMSQVPMERLGQAQEIANAVVFLASDSAAYITGETLH
VNGGMYMV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 3e-27 43
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 2e-27 43
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 2e-27 43
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 1e-27 43
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 1e-27 43