Gene Information

Name : Ssed_2563 (Ssed_2563)
Accession : YP_001474298.1
Strain : Shewanella sediminis HAW-EB3
Genome accession: NC_009831
Putative virulence/resistance : Resistance
Product : sulfate transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0659
EC number : -
Position : 3111839 - 3113326 bp
Length : 1488 bp
Strand : -
Note : KEGG: vfi:VFA1052 sulfate transporter

DNA sequence :
ATGTTAAAAAACTTTAAAACTGATTGGATGTCCAATATCCGTGGCGACTTGCTCGCGGGTATCGTTGTCGCGTTAGCGTT
AATTCCCGAGGCTATCGCATTTTCTATTATTGCGGGTGTTGACCCGAAAGTGGGGTTATATGCCTCATTTAGTATCTCGG
TAGTGATCGCCTTTACTGGTGGCCGCAGCGGAATGATCTCTGCGGCAACCGGTGCGATGGCGCTGCTGATGATCACATTG
GTTAAAGAGCATGGTTTAGAATACTTGCTGGCTGCAACCGTGTTAACGGGGCTGCTACAGATTTTAGCGGGTTACTTAAA
ACTGGGTAGCTTGATGCGTTTTGTGTCGCGCTCTGTGGTAACCGGGTTTGTTAATGCGCTGGCAATATTGATTTTTATGG
CCCAGCTACCGGAACTCACCAATGTGACCTGGCATGTGTATGCCATGACAGTGGCTGGTCTTGGTATTATTTATCTCTTT
CCATACCTGCCGATTATCGGCAAATTAATTCCCTCTCCGTTGATCTGTATTATTGCGTTAACCGCTATTACCATGTTGTT
TAATATTGACGTGCGTACTGTCGGCGATATGGGTAATTTACCTGATACCTTGCCGATTTTCTTATGGCCCGATGTGCCGT
TAAATCTGGAAACCTTATTGATTGTATTGCCTTATTCCATGGGTCTTGCTGTGGTGGGCTTATTAGAGTCAATGATGACG
GCGACGATTGTCGATGACCTGACCGATACCAAGAGTGATAAAAATCGCGAGTGTAAGGGTCAAGGTATTGCCAACATGTT
CACTGGCTTTCTTGGTGGTATGGCGGGTTGTGCCATGATTGGTCAATCGATGATCAATATCAAGTCCGGTGGACGTGGAC
GCTTATCCACTTTAGCGGCGGGTATATATCTGTTAATTATGGTGGTATTTCTTGGGCCTTGGTTAAAACAGATCCCAATG
GCAGCATTAGTGGCGGTCATGATTATGGTGGCAATCGGTACCTTCTCATGGCGTTCAATTACCGATCTGAAAAAACATCC
ACTGTCGACCAACATTGTTATGCTAGCCACGGTAGTCATAGTGGTCGTGACGCATAATTTAGCCATTGGTGTGTTTATTG
GTGTGCTGCTTGCCTCACTATTCTTTGCTAATAAGATTAGTCGTATGATGGTGGTCAGAGATGATATTGCAAATAGTGAT
AGCCGTGAATATCGAGTTGTCGGGCAAGTATTTTTCGCATCATCAGATAAATTTATCGAGTCATTCGATTTCAAAGAGGT
GTTAGAGACGGTAACGATTGATCTGTCGGCAGCCCACTTTTGGGATGTGAGTGCGGTGTCTGCATTGGATAAAGTGGTGA
TTAAATTCCGCCGAGAGGGGACGCAAGTTAACCTCATCGGTATGAATCAAGCTACGAGCACTATCGTCGACAAATTCGGA
GTGCACGATAAACCTGAAGAAGTTGAAAAATTACTGGCTGGACACTAA

Protein sequence :
MLKNFKTDWMSNIRGDLLAGIVVALALIPEAIAFSIIAGVDPKVGLYASFSISVVIAFTGGRSGMISAATGAMALLMITL
VKEHGLEYLLAATVLTGLLQILAGYLKLGSLMRFVSRSVVTGFVNALAILIFMAQLPELTNVTWHVYAMTVAGLGIIYLF
PYLPIIGKLIPSPLICIIALTAITMLFNIDVRTVGDMGNLPDTLPIFLWPDVPLNLETLLIVLPYSMGLAVVGLLESMMT
ATIVDDLTDTKSDKNRECKGQGIANMFTGFLGGMAGCAMIGQSMINIKSGGRGRLSTLAAGIYLLIMVVFLGPWLKQIPM
AALVAVMIMVAIGTFSWRSITDLKKHPLSTNIVMLATVVIVVVTHNLAIGVFIGVLLASLFFANKISRMMVVRDDIANSD
SREYRVVGQVFFASSDKFIESFDFKEVLETVTIDLSAAHFWDVSAVSALDKVVIKFRREGTQVNLIGMNQATSTIVDKFG
VHDKPEEVEKLLAGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ABTW07_3869 YP_005797117.1 sulfate permease Not tested AbaR4e Protein 1e-162 77
sup AEZ06030.1 sulphate permease Not tested Tn6167 Protein 3e-165 76
BJAB07104_00259 YP_008207724.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 3e-165 76
BJAB07104_00275 YP_008207740.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 3e-165 76
BJAB0868_00263 YP_008211589.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 3e-165 76
sup AFH57200.1 sulfate permease Not tested AbaR4a Protein 2e-165 76
BJAB0868_00279 YP_008211605.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 3e-165 76
sup AFV47947.1 sulphate premease Sup Not tested AbaR25 Protein 2e-165 76
ABZJ_00239 YP_005524195.1 sul1delta fusion protein Not tested AbaR22 Protein 3e-165 76
sup AFV47978.1 sulphate premease Sup Not tested delta-AbaR25 Protein 2e-165 76
ABZJ_00258 YP_005524214.1 sul1delta fusion protein Not tested AbaR22 Protein 3e-165 76
ABTW07_3910 YP_005797158.1 sul1delta fusion protein Not tested AbaR4e Protein 3e-165 76
sup AEQ20903.1 sulphate permease Not tested Tn6166 Protein 3e-165 76
ABK1_0240 YP_005512812.1 Sul1delta fusion protein Not tested AbaR4d Protein 3e-165 76
unnamed AEO37462.1 Sup* Not tested AbaR4 Protein 8e-163 76
sulI CAJ77098.1 sulfate permease Not tested AbaR1 Protein 7e-154 74
sup AGK36657.1 sulphate permease Not tested AbaR26 Protein 7e-154 74
ACICU_00239 YP_001844898.1 MFS superfamily sulfate permease Not tested AbaR20 Protein 9e-154 74
sup ACN81033.1 sulphate permease Not tested AbaR5 Protein 9e-154 74