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Name : Ssed_2340 (Ssed_2340) Accession : YP_001474077.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : aminotransferase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0436 EC number : - Position : 2837310 - 2838524 bp Length : 1215 bp Strand : + Note : broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor DNA sequence : ATGCGTCCAATTATAAAATCAAATAAGCTAGATACCGTCTGTTATGACATTCGAGGGCCTGTGCATAAAGAGGCGCGCCA TCTCGAAGACGAAGGCCATAGAATTTTAAAGCTTAATATCGGTAATCCGGCTCCCTTTGGTTTTGAAGCACCGGAGGAGA TTGTCCGTGATGTCATCTTAAATCTTCCCAGCGCGCAGGGGTATTGTGAGTCGAAAGGACTTTTCTCTGCCCGTAAGGCC ATAGTGCAGCACTATCAATCGCAGGGGATCTTTGGTGTCGATATTGAAGATGTCTATATTGGTAATGGCGTATCCGAGCT TATTGTGATGGCGATGCAGGGACTGTTAAATACCGATGACGAGGTGCTCATCCCCTCACCCGATTACCCCTTATGGACAG CTGCCGTTCACCTGTCAGGCGGCAAGGCACAACATTACCGCTGTGATGAGGAATCTGATTGGTTTCCCGATCTGGACGAT ATCAAGAGTAAGATCACGCCTCGCACCCGGGCTTTAGTACTCATCAACCCCAATAACCCAACGGGCGCGGTTTACTCCAG AGACCTACTGCTTGAAGCCGTCGAGATCTGTCGTCAGCATGATCTGATCCTGTTCGCAGATGAGATTTACGACAAGATAC TTTACGATGAAGCTCAGCATATTCCTGCTGCCAGCCTCTCAGATGACATCTTAACCGTGACATTCAATGGCCTGTCCAAA TCATACCGTGCCGCTGGCTTTCGTGTCGGCTGGATGATGCTATCGGGTAACTTAAAAGATGCTAAGAGTTATATCGAAGG CTTAGATATGCTGGCTTCGATGCGACTGTGTTCGAACGTGCCGAATCAACACGCCATTCAGACCGCATTGGGAGGTTATC AGAGTATCAATGAGCTGCTTATCGATGACGGCCGTTTGAAAGTACAGCGCGATACCTGCGTTGAATTACTCAACCAAATC CCGGGCATAAGTGTCAAATGTCCCAAAGGGGCCATGTACGCTTTCCCTAAGCTCGATGCTAAGAAATTTAACATCCGTGA TGACGAACGTTTGGTTCTCGATCTTCTGAAACAGAAAAAAATTCTTCTGGTACAAGGCACCGCCTTCAACTGGCCAGAAC CTGACCATCTCAGAGTCGTGTTTTTACCTCATAAAGAGGAACTTGAAAAAGCATTAATCGAGTTCGGTGAGTTTATGGAT GGCTACAGGCAATAA Protein sequence : MRPIIKSNKLDTVCYDIRGPVHKEARHLEDEGHRILKLNIGNPAPFGFEAPEEIVRDVILNLPSAQGYCESKGLFSARKA IVQHYQSQGIFGVDIEDVYIGNGVSELIVMAMQGLLNTDDEVLIPSPDYPLWTAAVHLSGGKAQHYRCDEESDWFPDLDD IKSKITPRTRALVLINPNNPTGAVYSRDLLLEAVEICRQHDLILFADEIYDKILYDEAQHIPAASLSDDILTVTFNGLSK SYRAAGFRVGWMMLSGNLKDAKSYIEGLDMLASMRLCSNVPNQHAIQTALGGYQSINELLIDDGRLKVQRDTCVELLNQI PGISVKCPKGAMYAFPKLDAKKFNIRDDERLVLDLLKQKKILLVQGTAFNWPEPDHLRVVFLPHKEELEKALIEFGEFMD GYRQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aspC | YP_005686363.1 | Aminotransferase AlaT | Not tested | PiCp 7 | Protein | 8e-114 | 57 |
| aspC | YP_005682179.1 | Aminotransferase AlaT | Not tested | PiCp 7 | Protein | 8e-114 | 57 |
| aspC | YP_005684271.1 | Aminotransferase AlaT | Not tested | PiCp 7 | Protein | 8e-114 | 57 |
| aspC | YP_003784329.1 | aspartate aminotransferase | Not tested | PiCp 7 | Protein | 8e-114 | 57 |
