Gene Information

Name : Ssed_2273 (Ssed_2273)
Accession : YP_001474010.1
Strain : Shewanella sediminis HAW-EB3
Genome accession: NC_009831
Putative virulence/resistance : Virulence
Product : pyruvate oxidoreductase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0674
EC number : -
Position : 2745709 - 2749302 bp
Length : 3594 bp
Strand : -
Note : KEGG: ppr:PBPRA1988 pyruvate oxidoreductase

DNA sequence :
ATGGCCAAGCAGGTAACCATAGACGGTGGAGAAGCCACAGCCTTCGTCGCTTATCGTACTAATGAAGTTTGCGCTATCTA
CCCAATCACGCCGTCTTCGACCATGGCAGAATTGGCCGATCAGTGGGCCAGTCAGAATATTGAAAATATCTGGCAACAGG
TGCCGCTTGTTGCCGAGATGCAGAGTGAAGGAGGTGCGGCCGGAACCGTACATGGCGCTCTGCAGACAGGCGCGCTGACC
ACCACCTTTACCGCCTCTCAGGGACTGATGTTGATGATCCCTAACATGTTTAAGATTGCCGGCGAGTTAACGCCCACCGT
GTTTCATGTTGCGGCGCGGGCCTTGTCGACCCAGGGTCTGTCGATCTTCGGCGATCATCAGGACGTGATGGCGGTACGAA
TGACGGGGTTTGCCCAGCTGGTCTCTTCGTCGGTACAGGAGTGTCATGACATGGCACTGGTGTCACAGGCGGTGACACTC
AACTGCCGCGTTCCTTTTATTCACTTCTTCGATGGCTTTCGTACCTCCCATGAGGTGAGCAAGATAGACCTGCTCGAAGA
TGAACAGATAAAGACGATGATCGATGATGAAATGGTTTTTGCTCATCGTTCGCGGGCACTAAACCCGGATAACCCCTTCA
TGCGTGGCAGTGCACAAAATCCGGATACCTATTTCCAGTCGCGGGAGTCCGCCAGTCGTTACTATAACGATGCCGTAGAG
GCGGTAGACGTGGCACTGGACAGGTTCTATCAAGTCACAGGTCGCCGATATCATAGCTTCGAATACTATGGAGACAAGGA
TGCTGAGCGGGTTATTGTCATCATGGGCTCTGGCAGCGAGACGGCGATAACCACGGCGCAGCATCTCAACGCACAAGATC
ATGTTACGCAAAAGAGTAGAGTCGGTGTACTACGGGTGCGCCTGTATCGGCCTTTTAGCTGCGAGCACCTGCTCAAGGCG
TTACCGCAATCGGTAACAAGTGTCGCCGTGTTAGACAGAACCAAGGAGCCCGGCAGCGATGGCGAGCCTCTATATAAAGA
TGTCAGTAATGCACTCTATCAGGCGGTAAGCAGAGGCGATCGTAAAACCATGCCCGTGGTCATTGGCGGCCGCTATGGTT
TAGCCAGCAAAGAGTTCACTCCTGCCATGGTGGCCAGGGTCTACCAGGAGCTTACAACTAAAGCGCCCAAGAACGATTTC
ACTATCGGTATCATCGATGATGTCTGCCACAGTAGCCTGGAGGTGAAGGAGAGCCTGGACATCGAGTCTGACAAGCTGGT
GCAGGCGATGTTTTATGGTCTGGGCTCCGACGGTACCGTCAGCGCCAACAAGAACAGCATCAAGATCATCGGCGGCGTCG
AAGGATACTACGCCCAGGGGTATTTCGTTTATGACTCCAAGAAAGCCGGATCACAGACGGTTTCTCATCTGCGTTTCGGC
CCCGAGCCTATTCGCGCGCCCTATCTTATCCAATCGGCAAACTTTATCGCCTGTCATCAATTCAGTTTCATCAAACATGT
GGAGATGCTGGAACGGGCGAAGCAGGGGGCCACTTTCCTCTTAAATAGTCACTACGATGCCGATCAGATCTGGGATCAAC
TTCCTGCCCATGTCCAACAGGAACTACTCGATAAGCAGATCAAATTCTATGTCATCGACGGAGCCAAGGTGGCCCGTTCG
GTCGGCATGGGTAAGCGTATCAATACCGTGATGCAAACCTGTTTCTTCGCGCTCTCCGGTGTGATGCCCAAGGAGCAGGC
TATCGAGCGGATCAAACAGGCGGCAGAAAAAACCTATGCCAAGAAGGGCGAAGAGGTGGTGAAGCGAAACTTTGCGGCCA
TCGAGCAGGCCCTGGCTCATCTGCAGCGGGTTAACTTGCCTCGCAAGGTGAGTAACACCAGCGGTAGGGAGGCCGATGGG
TTATTCGACCGCGCTTCCGGGTTTGTGAAAGAGGTGACCGCCGAGATGTTTCATGGCCGCGGCGATCGCATTCCCGTGAG
CATGCTACCCGACGACGGCACCTATCCTACCGGCACCAGTCAGTATGAGAAGCGAAGTATTGCCAGTGAGATCCCTATCT
GGGACAGGGAGATCTGCATTCAATGCGGTAACTGCGCCATTGTCTGTCCCCACGCCGCGATACGGGCTAAGTTTTATAAC
AAACGTCGGCTGCAGGGAGCGCCAACGACATTCCCGTCGAGTAATGTCACATCCCGTGGCTTCCCCGATGCACGATACAC
CTTGCAGGTTTATGCCGATGACTGTACCGGTTGCGGCCTGTGCGTGAAGGCCTGTCCCGTCAACCACACTGCCGACGAAC
ATCACCACGCAATTAACATGCAGAATAAAGAGAAGCATCTGCAGGATGAACGCAGGAATCTGGAGTTTTTTGAGACCATC
GCCTACAATCGGCGAACCCGGGTCGATTTTTCTAACGTTCGCGGCGTTCAGTTTCTGCAACCTCTGTTCGAGTTCTCGGG
TGCCTGTAGCGGCTGCGGTGAGACTCCGTATCTGAAGCTACTCAGTCAGCTGTTTGGCGATCGTATGCTTGTGGCCAACG
CGACAGGATGTTCATCGATCTATGGTGGCAACTTGCCGACCACGCCTTGGGCCAAGAACAGCGAAAACAAAGGCCCCGCA
TGGGCGAACTCGCTGTTTGAAGACAATGCCGAGTTTGGGTATGGCTACCGCCTCACCGCGGATAAGCACCTCGAGTTGGC
GCAATCCAGGCTATTGGCCTTAAAGGAGAGACTCGATCCTGAGCTGGTGGAGCAAACGGTTAATGCTCCACAATCCCATG
AATCTGAGATACACGAGCAGCAGGAGCGGGTAAAAGATCTGACAGAGCAGTTACAGACGTTGGACGATCCCAGAGCCAAA
GAGTTGCTGTCGGTTATCGATCACCTGGTGCGCCGCAGCATCTGGATAGTCGGTGGTGACGGCTGGGCCTATGACATCGG
CTATGGCGGCGTCGACCATGTGCTAGCCAGCGGTCGTGACGTTAACATCTTAGTGATGGACACTGAGGTTTACTCCAATA
CAGGTGGCCAATCATCCAAGGCAACCCCAATCGGAGCGGTCGCTAAGTTTGCGGCCGGAGGTAAGGCGGTGCCGAAGAAA
GATCTGGCGCTGCAGGCCATCGCCTACGGAAACGTCTACGTGGCACGTATCGCCCTTGGCGCCAGCCCACAACAGACCCT
GCAAGCCTTCCGTGAAGCCGAAGCCTATAACGGCCCGTCACTCATTATTGCCTACAGCCACTGTATCGAACACGGGATCA
ATATGATCGATGGCATGCAGCAGCAAAATCTGGCGGTAAAGGCCGGCTACTGGCCCCTGTATCGTTACAATCCGACGCTG
AGAAGTGCAGGACGTAACCCCTTTATGCTCGACTCACTACGCCCCACGTTGAAACTTGAGGATTACGCCTATAATGAAAA
CAGATACCTTAGCCTGTTAAAGTCCGATCCGGATGAGGCCGCGCGCCTTATCAATCTGGCACGCCAGGTGGTAAACCAGA
AATGGGCGCTGTATGAGGAGATGGCGACGCGAAATGCCCATAAGTTTACCCCTCATACCCGTAGTCGAACCTGA

Protein sequence :
MAKQVTIDGGEATAFVAYRTNEVCAIYPITPSSTMAELADQWASQNIENIWQQVPLVAEMQSEGGAAGTVHGALQTGALT
TTFTASQGLMLMIPNMFKIAGELTPTVFHVAARALSTQGLSIFGDHQDVMAVRMTGFAQLVSSSVQECHDMALVSQAVTL
NCRVPFIHFFDGFRTSHEVSKIDLLEDEQIKTMIDDEMVFAHRSRALNPDNPFMRGSAQNPDTYFQSRESASRYYNDAVE
AVDVALDRFYQVTGRRYHSFEYYGDKDAERVIVIMGSGSETAITTAQHLNAQDHVTQKSRVGVLRVRLYRPFSCEHLLKA
LPQSVTSVAVLDRTKEPGSDGEPLYKDVSNALYQAVSRGDRKTMPVVIGGRYGLASKEFTPAMVARVYQELTTKAPKNDF
TIGIIDDVCHSSLEVKESLDIESDKLVQAMFYGLGSDGTVSANKNSIKIIGGVEGYYAQGYFVYDSKKAGSQTVSHLRFG
PEPIRAPYLIQSANFIACHQFSFIKHVEMLERAKQGATFLLNSHYDADQIWDQLPAHVQQELLDKQIKFYVIDGAKVARS
VGMGKRINTVMQTCFFALSGVMPKEQAIERIKQAAEKTYAKKGEEVVKRNFAAIEQALAHLQRVNLPRKVSNTSGREADG
LFDRASGFVKEVTAEMFHGRGDRIPVSMLPDDGTYPTGTSQYEKRSIASEIPIWDREICIQCGNCAIVCPHAAIRAKFYN
KRRLQGAPTTFPSSNVTSRGFPDARYTLQVYADDCTGCGLCVKACPVNHTADEHHHAINMQNKEKHLQDERRNLEFFETI
AYNRRTRVDFSNVRGVQFLQPLFEFSGACSGCGETPYLKLLSQLFGDRMLVANATGCSSIYGGNLPTTPWAKNSENKGPA
WANSLFEDNAEFGYGYRLTADKHLELAQSRLLALKERLDPELVEQTVNAPQSHESEIHEQQERVKDLTEQLQTLDDPRAK
ELLSVIDHLVRRSIWIVGGDGWAYDIGYGGVDHVLASGRDVNILVMDTEVYSNTGGQSSKATPIGAVAKFAAGGKAVPKK
DLALQAIAYGNVYVARIALGASPQQTLQAFREAEAYNGPSLIIAYSHCIEHGINMIDGMQQQNLAVKAGYWPLYRYNPTL
RSAGRNPFMLDSLRPTLKLEDYAYNENRYLSLLKSDPDEAARLINLARQVVNQKWALYEEMATRNAHKFTPHTRSRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AFJ97267.1 pyruvate ferredoxin Virulence Not named Protein 0.0 45