|
Name : Ssed_2171 (Ssed_2171) Accession : YP_001473908.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : - Position : 2626778 - 2628031 bp Length : 1254 bp Strand : - Note : KEGG: she:Shewmr4_3210 DNA-directed DNA polymerase DNA sequence : ATGTTTGCTTTGGTCGATGCCAACTCCTTTTACTGCTCCGCCGAGCAGGTATTTCGTCCCGAATGGCGCGGTCGCCCGAT TGTGGTTCTGTCGAACAACGATGGATGTATCGTAGCGGCGAATCGTCAGGCCGTTGATGCCGGGATCCCCAAGTTCGAGC CCTTTTTCAAGGTTAAGTCACAATGTGAGCGGTTGGGCGTGATTGCACTCAGTTCAAACTATGAACTCTACGGCTCGTTG TCGGCCAGTATGATGGAGGTCATAGGCCGCTTTGCGCCCGAACAGCATATCTACAGCATCGATGAATCCTTTCTCTCCTT TAAACACTGCTCTACGGCGATCCCCTGTTTAATTAAGCATGGTGAGGCCTTGAGGCGTGCCGTCTGGAAAGAGACCCGCT TACCGGTGTGCGTTGGCATGGCAGAGACGCTCACCCTGGCCAAGATTGCTAATCATGCCGCAAAGAAACATGAGGGATAT CATGGTGTCTGCCTAATCGACAATCCACAGCAACGTAAAGCGATCTTACTTAAAATGCTCCCGGGAGATGTATGGGGGAT CGGGCGCCGCTTGGCTAAGCGCCTGGATATGATGGGCATCAAGACCGCCTATGCCCTGTCTCAAATGGCGCCCGGGATTG CCAGAAAGCAATTCAGCATTGAGGTCGAACGCACCGTCCGTGAGCTCAATGGCGAAGCCTGCAAAGGCTGGGACGAGGCC CGCGCAGATAAGCAGCAGATATTTTCCACACGTAGCATGGGTGAGCGGATAGTCGATGCCACCTCACTGCAACAGGCATT AAGTAAACATGCGGGAATAGCCACCAGCAAGGCAAGAGAGCAAGGCTCACTGTGTTCGGTAATACATATTTTTGCATCGA ACTCCCCCTTCGATGAACACCCGACTGGCTTTAAAATCACCCACCGTTTTGCTTATCCTACTAACGATACCGGCGAGATC ACCGAGGTGGTCAACCGCATAGCCGCACGGCAATTTCGAGAAGGGGTCCGCTACTACAAGGTGGGTGTAGGCTTGATCGA TCTGGTCAGCGAAGCACATCTGCAGGGGGATCTGTTTGAGCCTCCTAAAAACCCCGCATTAATGCGGGTGTACGATAGGC TTAACCATAGGTATGGCTCAGACTCACTCTTTATGGCTGCCCAGGGGATCACCCCGAAATGGAGCATGCGCAGACAATAC CTTAGCCCCCAATACACCACATGCTGGAAGGATCTGCCTAAGATACAGTGCTAG Protein sequence : MFALVDANSFYCSAEQVFRPEWRGRPIVVLSNNDGCIVAANRQAVDAGIPKFEPFFKVKSQCERLGVIALSSNYELYGSL SASMMEVIGRFAPEQHIYSIDESFLSFKHCSTAIPCLIKHGEALRRAVWKETRLPVCVGMAETLTLAKIANHAAKKHEGY HGVCLIDNPQQRKAILLKMLPGDVWGIGRRLAKRLDMMGIKTAYALSQMAPGIARKQFSIEVERTVRELNGEACKGWDEA RADKQQIFSTRSMGERIVDATSLQQALSKHAGIATSKAREQGSLCSVIHIFASNSPFDEHPTGFKITHRFAYPTNDTGEI TEVVNRIAARQFREGVRYYKVGVGLIDLVSEAHLQGDLFEPPKNPALMRVYDRLNHRYGSDSLFMAAQGITPKWSMRRQY LSPQYTTCWKDLPKIQC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 2e-65 | 41 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 2e-65 | 41 |
