|
Name : Ssed_2163 (Ssed_2163) Accession : YP_001473900.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Virulence Product : transport system permease Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0609 EC number : - Position : 2614965 - 2615975 bp Length : 1011 bp Strand : - Note : KEGG: sdn:Sden_1117 transport system permease DNA sequence : ATGCGGCTGTTTAACCCTACACTGTTACTGGCACTCTTGATCCCCTTGGCTGTGATATCGCCCTTGATTGCCATTGTGCT CGGCAGTGCCGACATCAGCCTGGCCGAAGTAATTGGCGCCATAGGCCGCAGTGTCACGACCCTGTTCCAGACAGAATCAA ACACGTCACTGGCAGATCGCATCATCATCGAACTCAGAATGCCACGGGCCTTGATGGCTATGGTATGTGGTGCCGGGCTC GCGGTATCGGGCTCTGTACTTCAAAGCGTAACCAGAAACCCCCTCGCCGATCCTTACCTGTTCGGCATCTCCGCAGGGGC ATCCCTTGGGGCGATTCTGGCACTCACAGGTGGGTTAACCTTTCTTCCCCTGCCTGTTAGCGCATTTTTAGGCTCCTTGA TTGCCGTCGCCGTTGTGGTGGTGATGGCACGGGATGGCCAGGTTGAAACCCTGGTGCTATCGGGCGTCGCCATCTCCTTC CTGCTCTCATCAATTGCCAACCTTGTTTTGTACTTCGGCGATCCCCAAGCCATGCAGGCAGTGCTGTTTTGGTCTCTTGG CAGCTTCAGCCGTGCCACCTGGAGCACACTCATGGTACCTGGCTTTATTGTGATCATTGCCACTGTGATTATTTACCAAT TTCAGCGCCCATTGCAGGCACTGATGGCCGGCGACGAGAGCGCTCATACTCAGGGCGTTGCAGTTCTCCCCCTGCGTTTA GGCATGTTAATTCTTACAGCCCTGATGACCTCATCATTAGTGGCGGCCTGCGGTGGTATCGGATTTGTCGGACTGATGGT ACCTCATATCGTCCGCATGCTTATCGGTTCAGCAAGTTCAAGTTCTCTCATTGCCACGGCTTTGCTCGGTGGCGTACTCA TGGTGTGGGTCGATCTGTTGGCCAGACTGATCCTGCCGGCACAGGAACTTCCTGTCGGTGTGATGACCGCCATGCTGGGT AGTGTCTTTTTCATCGGTTTGTTGGTTAAGCGTAAACAGGGGCATAGATAG Protein sequence : MRLFNPTLLLALLIPLAVISPLIAIVLGSADISLAEVIGAIGRSVTTLFQTESNTSLADRIIIELRMPRALMAMVCGAGL AVSGSVLQSVTRNPLADPYLFGISAGASLGAILALTGGLTFLPLPVSAFLGSLIAVAVVVVMARDGQVETLVLSGVAISF LLSSIANLVLYFGDPQAMQAVLFWSLGSFSRATWSTLMVPGFIVIIATVIIYQFQRPLQALMAGDESAHTQGVAVLPLRL GMLILTALMTSSLVAACGGIGFVGLMVPHIVRMLIGSASSSSLIATALLGGVLMVWVDLLARLILPAQELPVGVMTAMLG SVFFIGLLVKRKQGHR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CpC231_1907 | YP_005684260.1 | Iron(III) dicitrate transport system permease fecD | Virulence | PiCp 7 | Protein | 5e-30 | 42 |
| cpfrc_01919 | YP_003784319.1 | hypothetical protein | Not tested | PiCp 7 | Protein | 5e-30 | 42 |
| CpI19_1928 | YP_005686352.1 | Iron(III) dicitrate transport system permease fecD | Virulence | PiCp 7 | Protein | 4e-30 | 42 |
| Cp1002_1913 | YP_005682168.1 | Iron(III) dicitrate transport system permease fecD | Virulence | PiCp 7 | Protein | 5e-30 | 42 |
