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Name : Ssed_2131 (Ssed_2131) Accession : YP_001473868.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 2579133 - 2580419 bp Length : 1287 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGATCCAAAATTTTTACGTACAGAATTAGAAGCTACGGCCGAGCGCCTGGCAACCCGCGGTTTTATTCTAGATGT TGAGCGTCTAAGTAAGTTAGAGGAAAAGCGAAAGTCGTTGCAAATGGCGACTGAAGAGCTGCAAGCTTCCCGTAATGCAA TATCCAAATCCATTGGACAAGCAAAAGCGAAAGGGGAAGATGTTGCACCTATCATGGCTCAAGTGGGCGATCTTGGTTCG CAACTCGATACAAAGAAGCAGGAGCTGGCAGAGTTACTCGAGACACTGAATGCTATTGCCATGAGTGTGCCAAACTTACC TGACGAATCTGTGCCTGCCGGTGCCGATGAAAGTGAAAATGTCGAGGTTAGACGTTGGGGCACACCTAAAGAGTTTAACT TTGAAGTGAAAGATCACGTCGAACTCGGTGAAACTTTAGGTGGATTAGATTTTAAAGCCGCGGTTAAAATTACCGGTACA CGCTTCATTATCATGAAAGGGCAAATTGCCCGCATGAACAGAGCACTGGCGCAGTTCATGCTGGACCTTCACACGACAGA GCATGGCTATACTGAAGCCTATGTTCCTCTGTTGGTTAATGAAGAGAGCTTGCTTGGTACGGGTCAGCTACCTAAATTTG GTGAAGACCTTTTCCATACCAAGCCTGCAACTGAAGAAGGCCAAGGTCTAAGCCTTATCCCAACGGCTGAAGTACCGTTA ACTAATATCGCGCGCGATACCATCATCGATGAAGCAGATCTTCCGGTTAAGTTGACTGCTCATACACCTTGTTTCAGAAG TGAAGCGGGATCTTACGGTCGTGATACTCGTGGTTTGATCCGCCAACACCAATTCGACAAGGTTGAACTGGTTCAATTGG TTAAGCCTGAAGATTCTATGGCTGCATTAGATTCATTAACAGGTCATGCAGAAACGGTTCTTCAGAAGCTGGAACTTCCT TATCGTACCGTTGTTTTATGTACGGGCGACATGGGCTTCGGTTCAAGCAAAACCTTCGATATTGAAGTTTGGCTACCAGC TCAAAACACCTATAGAGAGATCTCATCTTGTAGCAACATGCAAGACTTCCAGGCTCGTCGTATGCAAGCCCGTTACAAGG CTAAGTCAGCGAAAAAACCTGCACTATTACATACATTAAATGGCTCCGGACTCGCTGTAGGTCGTACGCTCGTAGCGGTA ATTGAAAACTACCAAAATGAAGACGGTAGCATCACAGTACCTGAAGTTTTACGTCCATACATGGGCGGTTTAGAAAAGAT CGGTTAA Protein sequence : MLDPKFLRTELEATAERLATRGFILDVERLSKLEEKRKSLQMATEELQASRNAISKSIGQAKAKGEDVAPIMAQVGDLGS QLDTKKQELAELLETLNAIAMSVPNLPDESVPAGADESENVEVRRWGTPKEFNFEVKDHVELGETLGGLDFKAAVKITGT RFIIMKGQIARMNRALAQFMLDLHTTEHGYTEAYVPLLVNEESLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPL TNIARDTIIDEADLPVKLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPEDSMAALDSLTGHAETVLQKLELP YRTVVLCTGDMGFGSSKTFDIEVWLPAQNTYREISSCSNMQDFQARRMQARYKAKSAKKPALLHTLNGSGLAVGRTLVAV IENYQNEDGSITVPEVLRPYMGGLEKIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 9e-112 | 55 |
