Gene Information

Name : Ssed_1951 (Ssed_1951)
Accession : YP_001473688.1
Strain : Shewanella sediminis HAW-EB3
Genome accession: NC_009831
Putative virulence/resistance : Unknown
Product : nitrate/nitrite response regulator; NarL
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2354966 - 2355607 bp
Length : 642 bp
Strand : -
Note : KEGG: pau:PA14_13730 nitrate/nitrite response regulator; NarL

DNA sequence :
ATGACTACAGCACAAATATTACTGGTTGATGACCACCCCACTCTGCGCCAAGGTTTGGCTCAACTTATCTCCTTAGAAGA
TAACCTGGACGTTGTCGCACAGGCAGGCTCGGGGGATGAGGCGATAAGCCTTGCCATAAAGCATTCACCGGATCTGATTT
TACTCGATCTCAACATGAAGGGCTTAAGCGGCATAGACACCCTAATCGCCCTTAAACGCGCCGAAGTGCAGAGTAAAATC
GTCATCTTCACCGTATCAGACAGTGAAAGTGATGTGTTGCAGGCCATCAAGTTCAATACCGATGGTTACCTCCTGAAAGA
CTCGGAGCCAGAAGAGCTTATCGAGAAAATCAATCTCGCCATCCAGGGGGAGTTTGTGATCAGCAACCCGCTAACCCAGA
TCATGGCAAGATCGTTGAGACCCAACAGTAAGAAAGTCTCACCACTTGAAAGCCTCACCCAACGTGAGCTGCAAAACCTC
AAGCTTATCGCCGCAGGCAAGAGCAATAAAGATATCGCCAACAAGCTCGGCATCGCCGAGACGACGGTCAAGGTTCACGT
GAAGAACCTGCTTAAAAAGCTGGGCTTAAAGAGCCGGGTCGAGGCGGCGGTATGGGCGGTGGAGCATAAGATCAGTCATT
AA

Protein sequence :
MTTAQILLVDDHPTLRQGLAQLISLEDNLDVVAQAGSGDEAISLAIKHSPDLILLDLNMKGLSGIDTLIALKRAEVQSKI
VIFTVSDSESDVLQAIKFNTDGYLLKDSEPEELIEKINLAIQGEFVISNPLTQIMARSLRPNSKKVSPLESLTQRELQNL
KLIAAGKSNKDIANKLGIAETTVKVHVKNLLKKLGLKSRVEAAVWAVEHKISH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
narP YP_217238.1 transcriptional regulator NarP Not tested SPI-12 Protein 3e-32 50