Gene Information

Name : Ssed_1697 (Ssed_1697)
Accession : YP_001473436.1
Strain : Shewanella sediminis HAW-EB3
Genome accession: NC_009831
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 2033408 - 2034160 bp
Length : 753 bp
Strand : +
Note : KEGG: sdn:Sden_2367 ABC transporter related

DNA sequence : 
ATGTCAGAAGTCAGTGCTATCACAGTAAACAATCTCGTTAAGTCAGTGGCTACCCAAGAGGGAGAACTTACTATCCTCAA
CGGCATTAATATGGATGTCAAGCAGGGGCAAAGTATTGCGATACTCGGGCCATCAGGTTCGGGCAAGTCGACCTTGCTTG
GATTACTCGCCGCCCTGGACTCTCCGACCAGTGGAGAGATCATACTCGACGGTGTTGCTTTACAGTCTTTGGATGAGGAG
AAGAAGGCGGCTTTAAGAAAGCAGAAGGTCAGCTTTATTTTTCAGTCTTTCATGTTGGTCGATACTCTCAATGCGTTGGA
AAACGTGATGCTTCCTGCTGAGCTTGCAGGTATCCATCAGGCAAAAGAGAAAGCCGAGGCCATGTTAGAAAGAGTCGGAT
TAAGCCATCGACTCACACATTTCCCTAATCAACTGTCGGGTGGTGAACAGCAAAGAGTCGCCATTGCCAGAGCCTTTATA
TGCGAGCCTAAGGTATTATTTGCCGATGAGCCGACCGGAAATTTAGATGCGGTAAATAGTGAAAAGGTCGCTGACATGCT
GTTCGAGCTAAACAGAGAGAGTGAGACAACTTTAGTGTTAGTCACCCATGATCTGATATTAGCCAAGCGATGCCAGCGTC
AGCTGTTAATGGATACCGGCGTGATAACCGAATCTGAAGGTGAGCCTAATAAGGACAAGACTTTATCGAACAATCCGGCA
CAGAGTCATCTGGCCAGTGTGGAGGCGAGCTAA

Protein sequence : 
MSEVSAITVNNLVKSVATQEGELTILNGINMDVKQGQSIAILGPSGSGKSTLLGLLAALDSPTSGEIILDGVALQSLDEE
KKAALRKQKVSFIFQSFMLVDTLNALENVMLPAELAGIHQAKEKAEAMLERVGLSHRLTHFPNQLSGGEQQRVAIARAFI
CEPKVLFADEPTGNLDAVNSEKVADMLFELNRESETTLVLVTHDLILAKRCQRQLLMDTGVITESEGEPNKDKTLSNNPA
QSHLASVEAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-26 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-26 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ssed_1697 YP_001473436.1 ABC transporter NC_012469.1.7686878. Protein 3e-33 43