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Name : Ssed_1658 (Ssed_1658) Accession : YP_001473397.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : - Position : 1984830 - 1986869 bp Length : 2040 bp Strand : + Note : decatenates replicating daughter chromosomes DNA sequence : ATGATCCTCTATATTGCCGAAAAACCCTCCCTTGGCCGTGCTATTGCCGATGTACTGCCTAAGCCCCATAAGAAAGGCGA TGGTCATATCATGGCCGCCAATGGGGATTGTGTCTCATGGTGTATTGGTCATTTGCTGGAACAAGCCGAACCCGACCATT ATGACCCTCTATTTAAGTCCTGGAAGTTCGAACACCTTCCCATCATCCCGCAGCAATGGAAGATGAAAGCTAAACCTAAG ACACGCTCACAACTCACCGTGCTAAGGGGCTTAGTGAAAAAGGCTTCACAGCTTGTCAATGCCGGTGACCCTGACCGTGA GGGGCAACTACTGGTCGATGAAGTGATAGCTCATCTTGGCGTCAAGGGTGAAAAACTCAATAACACCCAGCGTCTGCTTA TCAGTGATCTGAACCCTCAGGCGGTCAAACGTGCATTAGGTCAGATGCGCAGTAATCGAGAGTTTATTCCCTTATCCACC TCAGCCTTGGCCCGCTCCAGAGCGGACTGGCTCTATGGTATGAACATGACCCGTGCCTACACGCTTCAGGGGCGCAAGGT GGGTTATCAGGGCGTGCTCTCGGTAGGTCGGGTACAGACGCCGCTGCTTGGTTTGGTGGTCAGGCGCGATGAAGAGATCG CGAATTTTGTCTCTAAGCCCTTCTTTGAGGTGTTGGCGAATCTGACAACGGATAACAAGGAGGCGTTTAAGACGAAATGG CAGCCCAGTGCGGCATGTCAGCCTTACATGGACGAAGAGGGAAGAGTGCTGGCTAAAGGCTTAGCGCAAAACGTCGTCGG CCGAATTACGAATAAGCCCGCCGAAGTGACGCAAGTGCTGGCGAAAGATAAGAAACAGAATGCACCGCTGCCATACAGCC TATCATCACTGCAGATCGATGCTGCCAAACGCTTCGGCATGAGCGCAAAAGAGGTCCTCGATACCTGTCAGACTCTATAT GAACGGCACAAATTGATCACCTACCCTAGATCAGACAGTCGCTACCTGCCAGTCGAACAGTTTCAACAAGCGTCCCAGGT CGTTTCAGCGGTAAGCTCCGGCGCAGCCGAACTGCTAGAGGGGATGACTGCCCCCGATACCAAGATAAAATCCAAGGCGT GGAATGATAAGAAGGTCGACGCTCACCACGCGATCATTCCAACCGAGAAAACCGCTAATCTGTCTCAATTGGGGGCCCGT GAAAGGCAGATCTATCTGCAGGTTGCCCGTCAATACCTGGCGCAGTTTTATCCCCCATACCTCTATAGTGAAACAGAGGT TCATGTCTTGATCGAGGGCGGGAATTTCAAGACTAAGGCGAAGCAGGAAAGAGCACTGGGTTGGAAGCAACTTTTCGGTC GAAATAGCGACAAGCAAAAATCGAATGGCCCTGATAGTAAGAATAACAGTGATGATGATGAAGAGTCGAGTCAGGTACTA CCGCCCTTAGTTAAAGGTCAGCAACTTCACTCGGGCATGGGGGAGCTTGTCGAGAAACACACCCAGGCCCCTAAACACTT TACCGATGCGACTCTGCTAGGTGCGATGACAGGGATCAGTCGTTATGTCACCGACCCCGAGATCCGAAAAATTCTTAAAG ACACCGATGGCCTGGGAACCGAAGCTACCCGAGCGGGGATTATTGAGCTGTTATTCAAGCGAAGTTTTCTGTCGAGGCAG GGGAAATCAATTCTCTCAACTGAGGTAGGCCAAGGCTTAATCAATAGCCTGCCTATGAGTGCGACCACGCCCGATATGAC GGCACTGTGGGAGAGTAACTTAGACGCTATCTGTCGAAAAGAGGCGAAGTATTTAAGCTTCATGTCACCATTAATCGCTT CACTGTCTGAGTTAATTACTCAGGCAGGTTCACAGTTGCCTTCTGCATTGCAGGGGGTAAAGGCGCCGGCTAACAGTTTC AGGAAAAAACGCTACAGTAAGTCGCTTGGCAGTGGCCGCAAAAAGTCGACAACGGGTTCTACTTCCCGTACCTCAGCCAC AAAAAAACGGGCGAGCAGTAAAACTCAAACTAAGGGCTAA Protein sequence : MILYIAEKPSLGRAIADVLPKPHKKGDGHIMAANGDCVSWCIGHLLEQAEPDHYDPLFKSWKFEHLPIIPQQWKMKAKPK TRSQLTVLRGLVKKASQLVNAGDPDREGQLLVDEVIAHLGVKGEKLNNTQRLLISDLNPQAVKRALGQMRSNREFIPLST SALARSRADWLYGMNMTRAYTLQGRKVGYQGVLSVGRVQTPLLGLVVRRDEEIANFVSKPFFEVLANLTTDNKEAFKTKW QPSAACQPYMDEEGRVLAKGLAQNVVGRITNKPAEVTQVLAKDKKQNAPLPYSLSSLQIDAAKRFGMSAKEVLDTCQTLY ERHKLITYPRSDSRYLPVEQFQQASQVVSAVSSGAAELLEGMTAPDTKIKSKAWNDKKVDAHHAIIPTEKTANLSQLGAR ERQIYLQVARQYLAQFYPPYLYSETEVHVLIEGGNFKTKAKQERALGWKQLFGRNSDKQKSNGPDSKNNSDDDEESSQVL PPLVKGQQLHSGMGELVEKHTQAPKHFTDATLLGAMTGISRYVTDPEIRKILKDTDGLGTEATRAGIIELLFKRSFLSRQ GKSILSTEVGQGLINSLPMSATTPDMTALWESNLDAICRKEAKYLSFMSPLIASLSELITQAGSQLPSALQGVKAPANSF RKKRYSKSLGSGRKKSTTGSTSRTSATKKRASSKTQTKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 4e-105 | 41 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 4e-105 | 41 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 3e-105 | 41 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 1e-96 | 41 |
