Gene Information

Name : Ssed_1596 (Ssed_1596)
Accession : YP_001473335.1
Strain : Shewanella sediminis HAW-EB3
Genome accession: NC_009831
Putative virulence/resistance : Unknown
Product : alcohol dehydrogenase
Function : -
COG functional category : R : General function prediction only
COG ID : COG2130
EC number : -
Position : 1906188 - 1907186 bp
Length : 999 bp
Strand : -
Note : KEGG: slo:Shew_2563 alcohol dehydrogenase, zinc-binding domain protein

DNA sequence :
ATGCAGGCTCAACAAATTCTCTTAGATTCTCGTCCCGAAGGGTTGCCAACAACAGCTAACTTCAAACTGGCTTCATCTCC
ATTAGCAGGCATTAACGATGGTGAGTTTCTGGTAAAAAACTTATGGATGTCTGTCGACCCTTATATGCGTGGTCGTATGA
TAGACAGAAAAAGTTACATCGCCCCGTTTGCCATAGGAGAAGTCCTTGAAGGTGGTGCCATCGGTGAAGTGATCGAGTCC
CGTCATCCTGAGTTTCCGGTTGGAAGTAAAGTCAGTAGCATGTTGGGTTGGCGCAGCCACTATGTGACCGATGGTAGTGA
TCATACTCGTCTGCCACAGACACCACTGAGTGAATCGCACTTTCTTGGCGTGCTGGGTATGCCGGGAATGACTGCCTGGA
CGGGTCTCAATCGAATCGCCGAGCTTAAAGAGGGAGAGACGCTTTTTGTTTCAGCCGCTTCAGGTGCTGTCGGTAGTGTG
GCTTGCCAGTTGGGTAAGTTGATGGGAGCCAAAGTTGTCGCATCTGTGGGCTCAGATGAAAAAGCAGAGCACCTATTATC
TATTGGTGTCGATGCTGTCATTAATTATAAAATATCGGAAAATTTAAGTGCTGAATTACACGCGGCAGCACCTGAAGGGA
TCGATGTTTATTTTGAAAATGTCGGCGGCGAGCACCTGTCTGCAGCACTCGACAACATGAATGACCATGGCAGAATTGCC
GTGTGTGGCATGATATCTCAATACAATGATACAAGGCCGACACCGGGCCCGAGCAATCTGGCCATGATCATCATAAAGAA
ACTAAAAATCGAAGGATTTATCGTATTCGAGCACTGGGCTCATTACCCTGAGTTTGCCAAGCAGATGGGGCAGTGGTTAG
CCAGTGGAGCGGTTAAAGCAGAGCAAACGGTCTACGAAGGGCTTGAACGGGCACCGGATGCGTTTATCGGTTTATTCGAA
GGTAAGAACCGCGGCAAGATGGTGGTAAAACTCGCTTAA

Protein sequence :
MQAQQILLDSRPEGLPTTANFKLASSPLAGINDGEFLVKNLWMSVDPYMRGRMIDRKSYIAPFAIGEVLEGGAIGEVIES
RHPEFPVGSKVSSMLGWRSHYVTDGSDHTRLPQTPLSESHFLGVLGMPGMTAWTGLNRIAELKEGETLFVSAASGAVGSV
ACQLGKLMGAKVVASVGSDEKAEHLLSIGVDAVINYKISENLSAELHAAAPEGIDVYFENVGGEHLSAALDNMNDHGRIA
VCGMISQYNDTRPTPGPSNLAMIIIKKLKIEGFIVFEHWAHYPEFAKQMGQWLASGAVKAEQTVYEGLERAPDAFIGLFE
GKNRGKMVVKLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0097 YP_252012.1 hypothetical protein Not tested SCCmec Protein 2e-57 43