|
Name : Ssed_1487 (Ssed_1487) Accession : YP_001473226.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : NupC family protein (permease) Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG1972 EC number : - Position : 1765809 - 1767020 bp Length : 1212 bp Strand : - Note : KEGG: ppr:PBPRB1458 NupC family protein (permease) DNA sequence : ATGCAGTTGTTGATTAGCTTGGCCGGGATCTTTTTTCTTATACTCTGTGGCTGGATTTTCTCTGAAAATCGCAGTGCAAT AAAATGGCGTACCGTTATCGGTGCACTAACCCTTCAGGCAGGCTTTGCAGCCCTGGTTCTCTACGTCCCTATGGGACAAC AGGTACTGGGCAGCGTCAGTCAAGGCGTCGCATCGGTATTAGGATTTGCCGACGAAGGCATTAAATTTCTGTTTGGCGAT CTGGCCAGCACAGGATTCATATTTGCGATTAGAGTATTACCTCTGGTGATATTCATCAGTGCCCTCATCTCCATGTTGTA CTACTTCGGCATCATGCAGTGGGTGATAAAAATCATTGGCGGAGCACTACAAAAGTTACTAGGCATCAGCCGCGCAGAGT CTCTGGTCGCCACTGGCAACATATTTCTGAGCCAGGGTGAGTCACCACTCTTGGTTAAGCCTTTCCTGCCCCAAATGACC CGCTCGGAGCTCTTTGCCGTTATGACCGGCGGAATGGCATCGGTAGCGGGTAGTGTCTTAGGTGGATATGCGGGTTTAGG TGTCGACCTTAAGTTCCTTATCGCGGCGAGCTTTATGGCCGCACCGGGCAGTCTGATGATGGCAAAGCTACTGGTACCGG AAGTCGAGACTCCTGACGCAGGCCAGGCAATCGATATGAACCAGAGTGAGCACAGCAATGCCATCGACGCCTTAGCCTCC GGCGCCATGAATGGTATGCGGGTAGCCGTGGCTATCGGTACTATGCTTATCGCATTTATCAGCGTCATCGCGATGTTTAA CGCTGGGCTGGAACAATTGGGTTTATGGTTCAACTTCGAAGGTGTCACGCTTCAGAGCTTGCTGGGTTATCTCTTCGCAC CGGTAGCCTTTATCATAGGTGTACCTGCCAATGAGATGATGCAGGCAGGGGGATTCATCGGGCAGAAGCTTATCCTGAAT GAATTTGTCGCCTTCATGGACTTTGTCTCGGTGAAAGATCAACTCTCGGCTCACTCTCAGATCATCATCACCTTCGCTCT ATGTGGTTTTGCCAACATAGGTTCAATTGCGATTCAGCTCGGCAGTATAGGTGTGATGGCACCGGAGCGCAGCGCTGATG TGGCAAACTTAGGCTTTAAGGCCGTTCTTGCCGCCACATTGGCTAACCTGATGAGTGCAGTTTTAGCCGGAATATTTTTC AGTATTGCTTAA Protein sequence : MQLLISLAGIFFLILCGWIFSENRSAIKWRTVIGALTLQAGFAALVLYVPMGQQVLGSVSQGVASVLGFADEGIKFLFGD LASTGFIFAIRVLPLVIFISALISMLYYFGIMQWVIKIIGGALQKLLGISRAESLVATGNIFLSQGESPLLVKPFLPQMT RSELFAVMTGGMASVAGSVLGGYAGLGVDLKFLIAASFMAAPGSLMMAKLLVPEVETPDAGQAIDMNQSEHSNAIDALAS GAMNGMRVAVAIGTMLIAFISVIAMFNAGLEQLGLWFNFEGVTLQSLLGYLFAPVAFIIGVPANEMMQAGGFIGQKLILN EFVAFMDFVSVKDQLSAHSQIIITFALCGFANIGSIAIQLGSIGVMAPERSADVANLGFKAVLAATLANLMSAVLAGIFF SIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| yutK | YP_005163383.1 | putative sodium/nucleoside cotransporter | Not tested | Not named | Protein | 4e-78 | 49 |
