Gene Information

Name : Ssed_1453 (Ssed_1453)
Accession : YP_001473192.1
Strain : Shewanella sediminis HAW-EB3
Genome accession: NC_009831
Putative virulence/resistance : Unknown
Product : 3-oxoacid CoA-transferase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1788
EC number : -
Position : 1723400 - 1724113 bp
Length : 714 bp
Strand : -
Note : KEGG: shm:Shewmr7_2399 3-oxoacid CoA-transferase, A subunit

DNA sequence :
ATGGCAGGACTCAATAAAGTTGTTGGCAGTTATGAAGAAGCTCTTAAAGGCTTAAGTAATGATATGACCATAATGGTCGG
CGGGTTTGGCCTGTGCGGCATTCCTGAAGGGCTTATCTCACAGATGGTTACGTCCGGAGTCAGCGGCCTGACCGCTATAT
CAAACAATGCCGGAGTCGATGATTTCGGCCTTGGCTTACTACTTAAGAGTCGTCAGATAGATACCATGATCGCCTCCTAT
GTCGGCGAAAACGCCACCTTCGAGCAGCAGATGCTATCGGGCCAGCTGAAGGTGATTTTGACTCCTCAGGGGACGCTGGC
AGAGAAAATCCGTGCGGGCGGCGCCGGGATCCCGGCCTTCTTTACCGCAACGGGCTATGGTACCCCTATCGCCGAAGGTA
AAGAGACCCGGGAGATCGATGGTCGCCACTACGTGCTCGAGCCTGCATTGACTGCCGACTTCGCCTTAGTACGGGCATGG
AAAGCCGATACCATGGGGAATTTAGTCTTCCGTAAAACCGCGGCAAACTTCAACCCTATGATGGCTACGGCTGGCAAGAT
CACTGTGGTTGAGGCGGAGCAGATCGTCGAGCCCGGAGAGTTAGACCCGGATCATATCCACACACCCGGTATCTACGTGA
ACCGTGTCATTCAGGGCAAGTTTGAGAAACGTATCGAGCAACGTACCGTTAAAGCCGCACCGGTTATTCTTTAA

Protein sequence :
MAGLNKVVGSYEEALKGLSNDMTIMVGGFGLCGIPEGLISQMVTSGVSGLTAISNNAGVDDFGLGLLLKSRQIDTMIASY
VGENATFEQQMLSGQLKVILTPQGTLAEKIRAGGAGIPAFFTATGYGTPIAEGKETREIDGRHYVLEPALTADFALVRAW
KADTMGNLVFRKTAANFNPMMATAGKITVVEAEQIVEPGELDPDHIHTPGIYVNRVIQGKFEKRIEQRTVKAAPVIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18070.1 unknown Not tested TTSS locus Protein 8e-34 42