Gene Information

Name : Ssed_1408 (Ssed_1408)
Accession : YP_001473147.1
Strain : Shewanella sediminis HAW-EB3
Genome accession: NC_009831
Putative virulence/resistance : Unknown
Product : cyclase/dehydrase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG2867
EC number : -
Position : 1670199 - 1670630 bp
Length : 432 bp
Strand : +
Note : KEGG: slo:Shew_1269 cyclase/dehydrase

DNA sequence :
ATGCCACAGATATCCCGCAGCGTGTTAGTGCGCTTTAGTGCAATGCAGATGTATGAAATTGTTAATGATGTCGAATCTTA
CAAAGAGTTCCTACCCGGCTGCGTCGGTGGCAAGGTGTTGGAATTCGATGGTGAAACCATGTTGGCTTCCGTCGACGTCT
CGAAGGCGGGGATCAGCAAAACCTTTACGACCAGAAATCAAATTATCCCAGGGAAAAGCATTCAATTAGTGCTCGAAAAT
GGTCCCTTTAATCACCTGGTCGGTGAGTGGCGCTTTACTGAACTGACAGAAGATGCGTGTAAAATTGACTTTGAGTTGAA
CTTTGAGTTTTCCAGCACTCTGGTGGATATGGCCTTCGGTAAAATTTTCAAAGAGTTGATGGCTTCGATGGTGACAGCTT
TTACCGGTAGAGCCAAAGTTATATACAGATAG

Protein sequence :
MPQISRSVLVRFSAMQMYEIVNDVESYKEFLPGCVGGKVLEFDGETMLASVDVSKAGISKTFTTRNQIIPGKSIQLVLEN
GPFNHLVGEWRFTELTEDACKIDFELNFEFSSTLVDMAFGKIFKELMASMVTAFTGRAKVIYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAA82716.1 - Not tested VPI Protein 2e-38 62