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Name : fliP (Tlet_0627) Accession : YP_001470257.1 Strain : Thermotoga lettingae TMO Genome accession: NC_009828 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : 3.1.1.3 Position : 640653 - 641405 bp Length : 753 bp Strand : - Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGCGGAAGATCCTGATTTTTATTCTTCTGCTTCTACCAGTACTAATTCATCCACAGGAAGAATTGCCTTTTCCATCTAT TGGCATCGAAATCTCTCCTGTTGGGAATGAACGTGATTTGGTTACGACACTCGAGATCCTTTTAATCATTACTGTTCTCG CACTTGCTCCAAGTATACTGATACTTTTTACATCTTTCACAAGAATTATAGTCGTATTTTCATTTTTAAGAAATGCCCTT GGAACAAGGCAAACACCCCCATCCCAAGTGCTTATAGGCCTGGCCCTATTTTTGACATTTTTCATTATGCAACCTGTATG GAATGACATATATAACGATGCTTTGACCCCATATATGGAAAAAGAAATAGGCTATGAAGAGCTATTCTCGCGAATGATAG GCCGAGTACGGCAGTTTATGCTGAAAGAACTCGTGGATCATCATAATGAAGATAACGTTTTCTTACTCGCATCGAGTGTG GGAAAAAAATTTGATAAAATTGAAGATGCGCCAAATTCAATTTTGATACCTGCCTTTGTGCTTGGTGAACTCGAAATAGG TTTTAAAATGGGAGTGCTTCTGTACATACCTTTTATTGTAATAGACATGATAGTCTCAAGTATATTACTCGCTATGGGAA TGATAATGATACCGCCTGTACTTATTTCACTCCCTTTTAAGGTGTTACTATTCATAGTTGTAAATGGATGGGATTTGCTT GTTTCTGGCTTGATAAAAAGTTTCGCGAGGTGA Protein sequence : MRKILIFILLLLPVLIHPQEELPFPSIGIEISPVGNERDLVTTLEILLIITVLALAPSILILFTSFTRIIVVFSFLRNAL GTRQTPPSQVLIGLALFLTFFIMQPVWNDIYNDALTPYMEKEIGYEELFSRMIGRVRQFMLKELVDHHNEDNVFLLASSV GKKFDKIEDAPNSILIPAFVLGELEIGFKMGVLLYIPFIVIDMIVSSILLAMGMIMIPPVLISLPFKVLLFIVVNGWDLL VSGLIKSFAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| escR | AAC38369.1 | EscR | Virulence | LEE | Protein | 2e-27 | 42 |
| escR | AFO66317.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 4e-28 | 42 |
| escR | AFO66400.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 4e-28 | 42 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 2e-28 | 41 |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 3e-28 | 41 |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 3e-28 | 41 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 1e-27 | 41 |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 1e-27 | 41 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 1e-27 | 41 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 1e-27 | 41 |
| unnamed | AAL06354.1 | EscR | Virulence | LEE | Protein | 8e-29 | 41 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 1e-27 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_001470257.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 2e-41 | 47 |
| fliP | YP_001470257.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 5e-42 | 46 |
| fliP | YP_001470257.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 1e-39 | 45 |
| fliP | YP_001470257.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 7e-41 | 44 |
| fliP | YP_001470257.1 | flagellar biosynthesis protein FliP | VFG0715 | Protein | 1e-27 | 42 |
| fliP | YP_001470257.1 | flagellar biosynthesis protein FliP | VFG0519 | Protein | 1e-28 | 41 |
| fliP | YP_001470257.1 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 6e-29 | 41 |
| fliP | YP_001470257.1 | flagellar biosynthesis protein FliP | VFG0827 | Protein | 6e-28 | 41 |
