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Name : Tlet_0230 (Tlet_0230) Accession : YP_001469864.1 Strain : Thermotoga lettingae TMO Genome accession: NC_009828 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 239175 - 240449 bp Length : 1275 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATAGACATCAGATTAATTCGTGAGAAACCGGATTTTGTGAAAAAAGCACTTGAGAAGCGAAATTACGAGAAAAAAAT GGTTGATGATCTACTCTCTCTTGATGCACAATTTAGAGAACTCACAAATCAGATTAACCAGCTCCGCGCACAAAGAAATT CCATCTCAAAGATGGTTGCCCAGGCAAAGTCATCCGGGAAAACAGAGGAGATAGAAAATCTAACTGAAGAAGGAAAAAAG ATAGGTAGGCAAATAGACTCTATAGAAGATCAATTAAAAGAAATAAAAGTTCAGATGGAAAAATTGATGCTTCTTGTCCC CAATATCCCAGACGATTCAGTACCCGAGGGAAAAGATGAAACTTCAAACAGAGAAATTCGAAAGTGGGGAGATCCGAAAA AATTTGATTATAATCCTCAGGCTCACTGGGACCTCGGTCCGTCTCTGGGCCTTATGGATTTCGATCGCGCGGCAAAACTA AGTGGTTCCAGATTTACTGTTATGTATGGGATGTTTGCAAAACTTGAAAGGGCTCTGACAAATTTTATGCTGGACATGCA TACAAAAGAGCACGGCTATACAGAAGTCTGGCTCCCCCACATAGTAAAACGAGAAACCATGACCATTACAGGGCAATTAC CAAAATTCGAAGAAGAGGCTTACAGAATAGAGGCAGATGATCTATTTTTAATACCAACTGCCGAAGTTCCTCTCGTGGCA CTCAGGTCTAATGAAATTCTTGAAGAAAAAGATCTTCCATTGCTTTATACGGCTTATACACCGTGCTATAGAAGAGAAGC GGGAAGTTATGGAAAAGATGTACGTGGAATGATCCGTCAACATCAATTTGACAAAGTTGAGCTGGTCTGGATAACCACAC CGGAAAGATCGTTCGAAGATCTCGAAACGCTTGTTTCCCACGCAGAAGAAGTTCTCAGAAGGCTTGAATTGCCTTACAGA GTTATTCAATTGTGCAGCGGGGATCTTGGATTTGGTGCGGCCAAAACTTATGATCTTGAAGTCTGGTTACCATCGTATAA TTCGTACAAAGAGATATCTTCCTGCAGCAACGATACAGATTTTCAGGCTCGAAGAGGCAACATAAGATACCGGAGAAAAG ACGGAAAAATTTCTTTTGTCCACACATTAAATGGTTCTGGCGTTGCAGTGGGCAGAACCTTAGTAGCAATAATAGAAAAT TATCAAAGGGCCGACGGCAGGATAGATGTACCAAAAGCACTGCAACCGTACCTTGGCTGTGAGGTGCTGGGATAA Protein sequence : MIDIRLIREKPDFVKKALEKRNYEKKMVDDLLSLDAQFRELTNQINQLRAQRNSISKMVAQAKSSGKTEEIENLTEEGKK IGRQIDSIEDQLKEIKVQMEKLMLLVPNIPDDSVPEGKDETSNREIRKWGDPKKFDYNPQAHWDLGPSLGLMDFDRAAKL SGSRFTVMYGMFAKLERALTNFMLDMHTKEHGYTEVWLPHIVKRETMTITGQLPKFEEEAYRIEADDLFLIPTAEVPLVA LRSNEILEEKDLPLLYTAYTPCYRREAGSYGKDVRGMIRQHQFDKVELVWITTPERSFEDLETLVSHAEEVLRRLELPYR VIQLCSGDLGFGAAKTYDLEVWLPSYNSYKEISSCSNDTDFQARRGNIRYRRKDGKISFVHTLNGSGVAVGRTLVAIIEN YQRADGRIDVPKALQPYLGCEVLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-100 | 49 |
