Gene Information

Name : Tlet_1320 (Tlet_1320)
Accession : YP_001470941.1
Strain : Thermotoga lettingae TMO
Genome accession: NC_009828
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1377483 - 1378160 bp
Length : 678 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM0705 ABC transporter, ATP-binding protein

DNA sequence : 
ATGATAAAAGTAAAAAATCTGTGGAAAATCTATGGTGAAGGAGAAGGGGCTGTACAGGCTCTTAAAGGCATAAATATTAC
TATAGAGCACGGAGAGTTTCTTGCCATACTTGGACCATCTGGTTCTGGCAAAACCACGTTGCTTAATTGTCTTTCTGGAA
TTGATGCTCCGACACGCGGTGAGATTTTTTTCAATGGGGTGGCTTTTCATTCGATGAGTGAAGAGAAAAAGACGCAATTT
CGAGCAAAATATATGGGTTTCATTTTCCAATTTTTCAACCTGGTACCTGTGCTTACTGCTATTGAGAATGTGGAATTGCC
TCTTAAGATTCTCGGCGTGAAACATACTGAAGCAAGGAATAGAGCTCTTGAAATGCTGAAAAAAGTTGGTTTATCAGACA
AAATCAACAGGTTTCCATCTCAGCTTTCAGGTGGTGAACAGCAGAGGGTAGCCATAGCAAGAGCGATTATTCACAATCCA
GATATAATATGGGCTGATGAACCAACCGGAAATCTCGATTCAGAAACCGGACTTGGCATAATAGAGCTGCTTGAAAGAAT
CAGGAATGAACATGGAACAACACTGGTAATCGTTACTCACGATGAACGAATAGCAAAGCGAGCAGATCGTGTGCTTACTA
TAAGAGACGGTAAGATTCTGAGTTTTTCTACGTTTTGA

Protein sequence : 
MIKVKNLWKIYGEGEGAVQALKGINITIEHGEFLAILGPSGSGKTTLLNCLSGIDAPTRGEIFFNGVAFHSMSEEKKTQF
RAKYMGFIFQFFNLVPVLTAIENVELPLKILGVKHTEARNRALEMLKKVGLSDKINRFPSQLSGGEQQRVAIARAIIHNP
DIIWADEPTGNLDSETGLGIIELLERIRNEHGTTLVIVTHDERIAKRADRVLTIRDGKILSFSTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-39 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-40 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-40 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-40 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tlet_1320 YP_001470941.1 ABC transporter-like protein NC_012469.1.7686878. Protein 5e-43 47
Tlet_1320 YP_001470941.1 ABC transporter-like protein CP001581.1.gene798.p Protein 4e-40 45
Tlet_1320 YP_001470941.1 ABC transporter-like protein NC_012469.1.7685735. Protein 5e-39 45
Tlet_1320 YP_001470941.1 ABC transporter-like protein NC_008702.1.4606598. Protein 6e-38 45
Tlet_1320 YP_001470941.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-40 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tlet_1320 YP_001470941.1 ABC transporter-like protein VFG0869 Protein 2e-15 41