Gene Information

Name : Tlet_1249 (Tlet_1249)
Accession : YP_001470872.1
Strain : Thermotoga lettingae TMO
Genome accession: NC_009828
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1306552 - 1307346 bp
Length : 795 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cno:NT01CX_1448 ferric enterobactin transport ATP-binding protein FepC

DNA sequence : 
ATGATTCAACTGAGCAATCTCTCATTTGCGTATAATGGCAAGCCTTTTATAAACCAGATAGAATTACTTATCGAGAAAGC
TAAAATAACCAGTATTATTGGGCCCAATGGATCAGGAAAATCAACTTTGTTGAACCTTATTGCTGGATTGTACAAACCTC
ATACGGGAAATGTTGTTATTGAGGGAAGCGATATTTTCAAAATAAGTAGAAAAGAGATAGCAAAGAAGCTCGCGATAGTT
TTTCAGCAAAATTATGCCCCAGAAGATATTACTGTTAAAGAATTGGTTCAGTTCGGTAGAAATCCTCATAAGAAATACTT
TGAATTGCTTAATGATGACGATGCAGGGGTTGTAGATTGGGCGTTGAGGGTGACAAACATGAACCACCTTTCCGACAGAT
ATGTTTCGCAATTATCTGGTGGCGAAAGGCAAAGAGCATGGATAGCCATGGGGCTGGTGCAGAGCACTGGAATTCTTCTT
TTGGACGAACCAACGACGTTTCTTGATATCAGGTATCAGATAGAAATACTCGAATTAATCAAGAAAATAAATGCAGATTG
CAAATTAACAGTAGTTATGGTGCTGCATGATTTAAATCAGGCTATCAGATACAGTCACCGGATTATAGTCATGAACTCCG
GCGAAATTGTAGCTAAGGGAGATCCCGGAGAGATAATCACTCCAGAGTTAATCAGAGAGGTGTATGGGGTAGAAGCGGAA
AAAATATTTATACGTCACAGCGGCGATAAGATCATACAATTGCTTTTTAAAAGAGCTTTTCGGGAGGAGAGATAG

Protein sequence : 
MIQLSNLSFAYNGKPFINQIELLIEKAKITSIIGPNGSGKSTLLNLIAGLYKPHTGNVVIEGSDIFKISRKEIAKKLAIV
FQQNYAPEDITVKELVQFGRNPHKKYFELLNDDDAGVVDWALRVTNMNHLSDRYVSQLSGGERQRAWIAMGLVQSTGILL
LDEPTTFLDIRYQIEILELIKKINADCKLTVVMVLHDLNQAIRYSHRIIVMNSGEIVAKGDPGEIITPELIREVYGVEAE
KIFIRHSGDKIIQLLFKRAFREER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 5e-47 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-45 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 8e-45 44
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 8e-45 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-45 44
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-45 42
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-45 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tlet_1249 YP_001470872.1 ABC transporter-like protein BAC0164 Protein 3e-47 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tlet_1249 YP_001470872.1 ABC transporter-like protein VFG0925 Protein 6e-44 46
Tlet_1249 YP_001470872.1 ABC transporter-like protein VFG1042 Protein 3e-47 45