|
Name : pyk (CCC13826_0964) Accession : YP_001466287.1 Strain : Campylobacter concisus 13826 Genome accession: NC_009802 Putative virulence/resistance : Virulence Product : pyruvate kinase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0469 EC number : 2.7.1.40 Position : 391172 - 392623 bp Length : 1452 bp Strand : + Note : identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064 DNA sequence : ATGATAAAAAAGACGAAAATTGTAGCGACTTTAGGGCCAGCAAGTGACAACGAAGAGACGATGGAAGCGATGGTTAAAGC AGGGGTTAATGTCTTTCGTTTAAATTTTAGCCACGGAACACACGAATACCACAAATCAAACATCGACAAGATAAGAAACA TCGAAAAAAGACTAAACAAACGCATAGGCATCTTGCAAGATATCTGCGGTCCAAAGATCAGAGTTGGCAAGCTTAGCGAG CCATTTTACTTAAAAGCTGGCGACGAGCTTAGCATCTACGCAGAGGATATCGTGGGCGAGAAGATCGAAAAGGGCGTTTA TAGAGTGAGCCTAAATCAGCCTCAAATTTTACCTATGCTAAAGGCTGGCGAGTACGTCTATCTCTACGATGGCTCGATCA GAGCAAGAGTTGTAGGCGAGGGCAAAGATGTGGTAAAAACCATCATCGAAAATGACGGAATTTTAAACTCAAACAAAGGG GTAAATTTCCCAAATACTACCCTTGGTATCGAGATCATCACGCCAAAAGATAAAGAAGATATGGAATTTGGCGCAAAGCA GGGCGTAAATTTCGTCGCCATTAGCTTCGTGCAAGACGCAAATGACGTGATAAAAGCGAGAAATATCTTAAAAGAATTTG GCTCCAAAGCGGCTATCTTATCTAAGATAGAGAAATTTGACGCGGTTGAAAACATAGACGACATCATCGCAAAGAGCGAT GGTATCATGGTAGCTCGTGGCGATCTTGGCATAGAAGTGCCATTTTACAAGGTGCCAACCATACAAAAGCTCATCATCAA AAAGGCAAATGCAGCCAGCAAGCCAGTCATCACAGCAACTCAGATGATGCTAAGCATGGCAGAGCATGAAACTGCCACAA GAGCGGAGATAAGCGACGTGGCAAACGCCGTGCTAGACGGCACTGATGCGGTTATGCTAAGCGAGGAGAGCGCGATCGGC AAAAACCCAGTCGCGGTCGTAGAGGCGATGAGCAAAACGATCATCCAGACGCAAAGCATCTATCCATACAATAAATTTGA CGAATTTGACTTTTTTGACGAGACTGACATGGTCGCAAATAGCGCAGCTTCGCTAGCTGTTCGCATCAAGGCAAATGCGA TACTCTCTATCACAGGCTCAGGCAAATCAGCTATAAAGCTAGCTAGAAACCGCACAAATATCGACATCATCGCTATCGCG CACGACGAGCAGACAGCTCACATGCTGACCCTTGCTTGGGGCGTGACGCCAGCGCTTGTGCTTGAAAAGACAAAGCTAAA TGTCCTTCTCGCAAATGTCATCAAAAAGGCTTATGATGCTGGATATGTCGAGCATGACAAGACCTATCTCGTCACAGCTG GCCACCCAACAGGTGTAGAGGGCAGCACAAACCTCATACGTATCATTAGACGCGACCAGCTTGATTATTACCTAGACCTT GCAACCGAGTAA Protein sequence : MIKKTKIVATLGPASDNEETMEAMVKAGVNVFRLNFSHGTHEYHKSNIDKIRNIEKRLNKRIGILQDICGPKIRVGKLSE PFYLKAGDELSIYAEDIVGEKIEKGVYRVSLNQPQILPMLKAGEYVYLYDGSIRARVVGEGKDVVKTIIENDGILNSNKG VNFPNTTLGIEIITPKDKEDMEFGAKQGVNFVAISFVQDANDVIKARNILKEFGSKAAILSKIEKFDAVENIDDIIAKSD GIMVARGDLGIEVPFYKVPTIQKLIIKKANAASKPVITATQMMLSMAEHETATRAEISDVANAVLDGTDAVMLSEESAIG KNPVAVVEAMSKTIIQTQSIYPYNKFDEFDFFDETDMVANSAASLAVRIKANAILSITGSGKSAIKLARNRTNIDIIAIA HDEQTAHMLTLAWGVTPALVLEKTKLNVLLANVIKKAYDAGYVEHDKTYLVTAGHPTGVEGSTNLIRIIRRDQLDYYLDL ATE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY1744 | NP_456147.1 | pyruvate kinase | Not tested | SPI-2 | Protein | 1e-53 | 41 |
| pykF | CAA68205.1 | pyruvate kinase like protein | Not tested | SPI-2 | Protein | 1e-52 | 41 |
| pykF | YP_216386.1 | pyruvate kinase | Not tested | SPI-2 | Protein | 5e-53 | 41 |
| pykF | NP_805051.1 | pyruvate kinase | Not tested | SPI-2 | Protein | 5e-53 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pyk | YP_001466287.1 | pyruvate kinase | VFG0479 | Protein | 2e-53 | 41 |
