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Name : serS (CCC13826_0773) Accession : YP_001466225.1 Strain : Campylobacter concisus 13826 Genome accession: NC_009802 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 317438 - 318682 bp Length : 1245 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATAAATTTAAAACTACTTGAGACAAACTACGATGAATTCGTAAAAAAACTAGAGGGCAAAAACGTTAAAGCCAGCCT ACTAGACGAGCTTTTGCACACTTTTAACGAGCTAAAGCAAAAGCGCAAAGCACTTGAAAATTTCCAAGCGATCCAAAATG CAAAGAGCAAAGAGCTTGGCGTAAAAGCAAGAGCTGGCGAAGATGTGAGCGAGCTTAAGAGTGAGCTAAATTTAAACAAA GCTGCTCTTGCTGACGCTGATGAGATCGTTAAACAATATGAAGAAAAGCTTGAGCAAATTTCATTTAGCGTGCCAAATAT CACTGACGATGATGTGCCATTTGGCAAAGATGAGAATGATAATGTCTGCATAAAAACGGTGCTTGAGCCAACTAAATTTG ACTTTAAGCCAAAGGAGCACTGGGAGCTAGGCGAGAGCCTTGGCTGGCTTGACTTTGAGAGGGGGGCAAAGCTCTCAGGA TCGCGCTTTACCGTGCTTCGAGGCATGGGAGCAAGACTTGGTAGAGCGCTTGTTAATTACATGATCGACTTTAACAGCGC ACGCGGATTTGAGCTTGTAAATGTCCCTTATCTAGTAAGCTCAAACACACTTTTTGGCACCGGTCAGCTGCCTAAATTTG AAGAGGATCTTTACAAGGTTCGCGACGAGGATCTCTACCTCATCCCAACTAGCGAAGTGCCTGTGACAAATTTATACAAT GACACGATCATTGAAGCTGAGCAGCTACCTATAAAGATGACTTGCTACTCAGCATGCTTCCGCCAAGAGGCAGGCTCAGC AGGACGTGACACCAGAGGCATGATCCGCCAGCACCAGTTTGAAAAAGTAGAACTTGTAAGCATCACAAAGCCTGATCAAA GCGAGGGCGTGCTTGCTGAGATGATATCTTGCGCTAGCGACTTGCTAACTAGCCTTGGGCTGCCTCACCGCCACATGCTA CTTTGCAGCGGCGATCTAGGCTTTAGCGCCGCAAAGACGATAGACCTTGAGGTTTGGCTACCAGGTCAGGGCAAATACCG CGAGATCAGCTCTATCTCTAATACTCGTGATTTTCAAGCAAGACGCGCAAAAATTCGCTTTAAAGATGGCAAGAAAAATA TGCTTGTAAATACCCTAAATGGCTCGAGCTTGGCTGTGGGTAGGACGCTAATAGCGATAATGGAAAACTACCAAAAAGCT GACGGCACTATCGAAATTCCAGAAGTTCTTAAAAGGTATATGTAG Protein sequence : MINLKLLETNYDEFVKKLEGKNVKASLLDELLHTFNELKQKRKALENFQAIQNAKSKELGVKARAGEDVSELKSELNLNK AALADADEIVKQYEEKLEQISFSVPNITDDDVPFGKDENDNVCIKTVLEPTKFDFKPKEHWELGESLGWLDFERGAKLSG SRFTVLRGMGARLGRALVNYMIDFNSARGFELVNVPYLVSSNTLFGTGQLPKFEEDLYKVRDEDLYLIPTSEVPVTNLYN DTIIEAEQLPIKMTCYSACFRQEAGSAGRDTRGMIRQHQFEKVELVSITKPDQSEGVLAEMISCASDLLTSLGLPHRHML LCSGDLGFSAAKTIDLEVWLPGQGKYREISSISNTRDFQARRAKIRFKDGKKNMLVNTLNGSSLAVGRTLIAIMENYQKA DGTIEIPEVLKRYM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-87 | 48 |
