Gene Information

Name : CCC13826_2088 (CCC13826_2088)
Accession : YP_001467594.1
Strain : Campylobacter concisus 13826
Genome accession: NC_009802
Putative virulence/resistance : Virulence
Product : methyl-accepting chemotaxis sensory transducer
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0437
EC number : -
Position : 1776887 - 1777624 bp
Length : 738 bp
Strand : -
Note : identified by match to protein family HMM PF00037

DNA sequence : 
ATGCAACAGACCCTAAACTCTCGTCGCAGTTTCATCACAGCTGCAGGACTGTTTTTCGCTACGACTGCACTAAAGGCAGC
ACCAAAGGACTTTAGTGGTAGTGGCGTTCGCTACGGCATGGCGATAGATCTAACAAGATGTGTTGGCTGTCAGTCATGTA
CTATGAGCTGTATGTTGGAAAATGACGTTCAGCCAGGTGCTTTTAGGACCATCGTCTCTGAGTACGAGGCAAAGGATAAA
AGCGGTAAAATGGCGGTCATTGCGTCACTTCCAAGACTTTGCAACCACTGCAACAAACCAGCCTGTATCGACGTTTGTCC
AACAGGAGCAAGCTATCAAAGAAGCAACGGCATCGTAAAGATCGACACAAAAGAGTGCATAGGCTGTGCACTTTGCGTGG
AGGCCTGTCCATATCACGCAAGATATCTTAGCTTGCATACCTACAAGGCCGATAAATGCACCTTCTGCGACCACAGACTA
AGAGCGGGACTTCAGCCAGCATGTGTAGAGAGCTGCGTGGGCGGTAGTCGTATAATAGGCGATCTTAACGATCCTAACTC
AAATATCAGAAAATTTCTAGCCACACACGAGACTATGGTTATAGATAGCCCTAAAAATACAAATCCACAGGTGTTCTACC
ACGGTGTTAGCGAAATTTTGGCTAAAAATGATAAGAAACTCGAGCTTGATAATGGATATAAAAAGGTTATCAGCTGGAGC
GAAGAGATAGCACAGTAA

Protein sequence : 
MQQTLNSRRSFITAAGLFFATTALKAAPKDFSGSGVRYGMAIDLTRCVGCQSCTMSCMLENDVQPGAFRTIVSEYEAKDK
SGKMAVIASLPRLCNHCNKPACIDVCPTGASYQRSNGIVKIDTKECIGCALCVEACPYHARYLSLHTYKADKCTFCDHRL
RAGLQPACVESCVGGSRIIGDLNDPNSNIRKFLATHETMVIDSPKNTNPQVFYHGVSEILAKNDKKLELDNGYKKVISWS
EEIAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 3e-51 54
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 3e-51 54
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 2e-51 54
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 2e-51 54
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 2e-51 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CCC13826_2088 YP_001467594.1 methyl-accepting chemotaxis sensory transducer VFG0486 Protein 1e-51 54