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Name : CCC13826_2089 (CCC13826_2089) Accession : YP_001467593.1 Strain : Campylobacter concisus 13826 Genome accession: NC_009802 Putative virulence/resistance : Virulence Product : orotate phosphoribosyltransferase (oprt; oprtase) Function : - COG functional category : C : Energy production and conversion COG ID : COG0243 EC number : 2.4.2.10 Position : 1773883 - 1776873 bp Length : 2991 bp Strand : - Note : identified by match to protein family HMM PF01568; match to protein family HMM PF04879 DNA sequence : ATGCAAAGAAGAGAATTTTTAAAAAGATCAGCTGTACTCTCAACACTAACCGCGAGCGCTGTGCTAGCAGATGGGGAAAA AGACGACTACAAACCGCAGTCAAACTCGCTAGAGCCTGAATTTAGCGTAAAAGACGGCAAAATTTCACTTAACGACGGAC ATAGCGTTGTCTTTTCTATGTGCCACGGCTGTACAACGAAGTGTGGCATAAGACTTCACGTAGATGACAAAAACGACCGA GTTTTAAGATGTAGCGGCAACCCATACCACCCACTCTCAAACGTACACTGGACAAATTTTGACACATCGATAAACGACGC TTTGCTTGCCACAACACTAAGCGGCGAAGATGAAAAGCGAGCCACAGTTTGCGCCAGAGGAGCGATCTTGCCTGAGATGA TAGACTCGCCTGCAAGGATACTAACGCCACTAAAAAGAGTTGGCAAAAGAGGCGAGGGCAAGTGGAAGAGCATAAGCTTT GAGCAGCTAGTAGAAGAGGTCGTAGAGGGCGGAGATCTCTTTGGTGAGGGGCACGTAGACGGGCTAAGAGCGATATATAG TGACGAGCTAATAGACAGCGAAAACCCAGAGTACGGCACTAAGCGCAACCAACTTTTAAGCTTTTACCTATATGACGGAC GCTCAGACATCGTTGATCGCTTTGTCAAAAAGTCATTTGGCACTATAAATCACTACTCACACGGCGGAATTTGCGGCGGC GGCTTCAGGGTTGGCGGCAAGATCGCGCACAACGCAAAGGGCTTTGCACACACAAAACCAGACTATGAAAACTCTAAATT TGTTATCTACTGGGGCACTTCGCCGTCAAATGGTGGCAACCCTTTCCAAAAACAAGCAAAAATGCTCTCTTACGCAAGAG GCACTAGAGATGACTTTAGCTACGCAGTGGTCGACCCAAGCGTTACAAACGCTGTAAAATACGCCTCTTCAGACAAAGGC CGCTGGATAGCGATAAAGCCAGGCACCGACTCAGCTCTAGCCATGGCGATGATACGCTGGATAATAGAAAATGAAAAATA CGCTACAAACTACCTTATCCAGCCAAATTTAGACCAAGCAAAGCTAGCAGGCGAGATACACTGGTGCAATGCCACGCATC TAGTTATCACCGAAAAAGGTCACAAAGACTACGGCAAATTTGCACTTATCAATAACGAGTGGCAGGTCTGCTCGCAAGAT GGTAAGATACAAAGCTACAAGGTAAATGAACCAGCCAAGCTCTACTACAAAGGCAAAATTTTAATAGACGGCGAAAAAGT CGAGGTAAAAAGCTCAATGCAGCTTTTAAAAGAGTCAGCTTATAAGCACAGCTTAGAGGAGTACTCAAAAATTTGTGGCG TAAGCGTTGAAGATATCATCTGGCTTTGCGAAAATTTCACCAAAAACGGCAGACAGGTGAGCACAAACGTGCATGGCGGT ATGATGCATACGCAAGCTGGTATGACTACTTTTGCGATACTTTGTCTAAACACGCTAATGGGCACTTACGGCTTTAAAGG CGGCAATGTCAATGCAAGTGCCGGCACACACGAGTTTTTAAAGGGCAGATATGACCTTGAGGGCTTTGAGGGCGCTTATA AGCCAAATGGTCTAAATTTATCAAGATCAGGCAAATACTACGAAACAAGCTCTGAATATAAGCGCAAAGTAGCAGCTGGC GGCAGCGGCTATCCATCAACTCAGCCATGGTATCCTATCTCTATGCCACTTGTAAACGAAACTCTTACAAGCCACAAGGC TGGCTATCCATACAAAGTAAAAGTTTTCATAAACTACATGACAAACGTACTTTACGGCCAAGCAGGACTTGAAAGAGCGG TTTTAGATGCGCTAAAAGATAGTAAAAATTTACCACTTTTTGTGGGTATCGACGCCTTTATGAACGAGACAAACGCCTAT GCTGACTACATCGTGCCAGACGGGGTAAATTTAGAAAACTGGGCACTTCCAAACTCTCTTTGGGGAACGATCGCTAAAAC TTCAGTCGTGCGTTATCCAGCTGTTAGCTCAAAGCAGGCAAAGGATAAAAATGGCGGCGTGATCGACGTTGAGGCGTTTT ATATAGCCGTAGCAAAGAGGCTTGGACTAAAAGGCTTTGGCAAAAATGCCTTCAAAGACAAAGACGGAAATTTCATGGAC CTTGACGTAAAAGAGCAGTATTACGCAGCTGCACTAGCAAATTTAGCCTTTGATGGCGAGGGTGTGAAAGATATAAGCGA CGAGGACAAAAAGCTTAGTAAGATATCAAGAGTGATGACAAAGCTTGATCCTTATCTAAAAGACGAAGAGAAGCCAAAAG TAGCGCACGTGCTAGCAAAAGGCGGCAGATATGATAGCTACGAGAGCGCGTACAAGGGCGATAAAGCAACCGTAAAAGTG CCAGCGCCTACGCCAGCTTCGATCTACTATGAGCCACTTGGCGGACACAGACACTCGGTAACAGGCGAATATATGCCAGG AGTGCCAAGTCTGATGTTGCCAGTAGCAAGTGACGGCACGCCGCTTGAGAAATTTTTCCCACGCTCTGAGTGGAAATACA CAGTTAGCTCAAGAAAGTCAAATATCCAGCACTTCTACACATTTGTTAGCCCAAGGCTAAGAGCCGTCCATCCTAGCAAC TTCGTAAGGATAGCGCCAGATGTGGCTAGCGAGCAGGGCATTCGCTCAGGCGATAAGGTCAAAGTGACTACGCCTTATGG CGCGCAGGTTGGCGAGGCGTTTGTAACAGACGGCGTTGCTAGCGGAGTTATCAGCATAGAGCATGGATTTGGACATGATG AGTTTGGTATAAGAACGCACATCGTCGATGGAAAGCCAGCTTTTGGGATAGCAAATTTAGAAAAAGGGGTCAATCACAAC AAACTTGGACTTCTTGATCCAAAAAGAAATGGCGAATTTAGCCTAAATGACTGGCTGGTTGGTACTTGCGCTAGACAAGC ACTTCCTGCAAAGATAAGAAAGATAGGCTAG Protein sequence : MQRREFLKRSAVLSTLTASAVLADGEKDDYKPQSNSLEPEFSVKDGKISLNDGHSVVFSMCHGCTTKCGIRLHVDDKNDR VLRCSGNPYHPLSNVHWTNFDTSINDALLATTLSGEDEKRATVCARGAILPEMIDSPARILTPLKRVGKRGEGKWKSISF EQLVEEVVEGGDLFGEGHVDGLRAIYSDELIDSENPEYGTKRNQLLSFYLYDGRSDIVDRFVKKSFGTINHYSHGGICGG GFRVGGKIAHNAKGFAHTKPDYENSKFVIYWGTSPSNGGNPFQKQAKMLSYARGTRDDFSYAVVDPSVTNAVKYASSDKG RWIAIKPGTDSALAMAMIRWIIENEKYATNYLIQPNLDQAKLAGEIHWCNATHLVITEKGHKDYGKFALINNEWQVCSQD GKIQSYKVNEPAKLYYKGKILIDGEKVEVKSSMQLLKESAYKHSLEEYSKICGVSVEDIIWLCENFTKNGRQVSTNVHGG MMHTQAGMTTFAILCLNTLMGTYGFKGGNVNASAGTHEFLKGRYDLEGFEGAYKPNGLNLSRSGKYYETSSEYKRKVAAG GSGYPSTQPWYPISMPLVNETLTSHKAGYPYKVKVFINYMTNVLYGQAGLERAVLDALKDSKNLPLFVGIDAFMNETNAY ADYIVPDGVNLENWALPNSLWGTIAKTSVVRYPAVSSKQAKDKNGGVIDVEAFYIAVAKRLGLKGFGKNAFKDKDGNFMD LDVKEQYYAAALANLAFDGEGVKDISDEDKKLSKISRVMTKLDPYLKDEEKPKVAHVLAKGGRYDSYESAYKGDKATVKV PAPTPASIYYEPLGGHRHSVTGEYMPGVPSLMLPVASDGTPLEKFFPRSEWKYTVSSRKSNIQHFYTFVSPRLRAVHPSN FVRIAPDVASEQGIRSGDKVKVTTPYGAQVGEAFVTDGVASGVISIEHGFGHDEFGIRTHIVDGKPAFGIANLEKGVNHN KLGLLDPKRNGEFSLNDWLVGTCARQALPAKIRKIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ttrA | YP_216391.1 | tetrathionate reductase complex subunit A | Virulence | SPI-2 | Protein | 5e-163 | 41 |
| ttrA | CAB37416.1 | tetrathionate reductase subunit A (TtrA) | Virulence | SPI-2 | Protein | 6e-163 | 41 |
| ttrA | NP_456144.1 | tetrathionate reductase subunit A | Virulence | SPI-2 | Protein | 4e-162 | 41 |
| ttrA | NP_805054.1 | tetrathionate reductase subunit A | Virulence | SPI-2 | Protein | 4e-162 | 41 |
| ttrA | NP_460348.1 | tetrathionate reductase complex subunit A | Virulence | SPI-2 | Protein | 8e-163 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CCC13826_2089 | YP_001467593.1 | orotate phosphoribosyltransferase (oprt; oprtase) | VFG0484 | Protein | 4e-163 | 41 |
