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Name : CCC13826_1838 (CCC13826_1838) Accession : YP_001465940.1 Strain : Campylobacter concisus 13826 Genome accession: NC_009802 Putative virulence/resistance : Virulence Product : S-layer-RTX protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG4690 EC number : - Position : 12630 - 14126 bp Length : 1497 bp Strand : + Note : identified by match to protein family HMM PF03577 DNA sequence : ATGAAAGGCAAAATTCTCGCATCAGTCGTCGCTATGAGTGCGATTTTAGGCACAAGTAGCTTGGCATGCACTACCATTTT AGTAGGAGATAAAGCCTCAAATGACGGCTCTATGCTAGTGGCTAGGAGCGCTGATAGCAAGGCTATAAAGGCTCAAGTCT TTTTGATACATCCAGCTACGAAAAACCAAACTGGCATGCACAGCTCAAAGGCACATGACGGCGCAAATGACTTTACATAT CCGCTCCCAAAAGATGGCATGAGATACACAACTATCGCAAACTCACACACAAAACTTCACGGAGCAGTCGGCTACAACGA GGCTGGCGTTGGACTTAGTGGCACTGAGACCATCTATGCAAAAGATGAGCTTTTAAAGATCGACCCATATAACGAAGAGA CCGGCATCACAGAAGATGACATCCCAGACGTGCTTTTGCCGCGCATCAAAAGCGCAAAAGAGGGCGTTAAGCTTCTTGGC GAGATAGTTGAGACAAAAGGCGCTGGCGAGGGCTTTGGCGTGGTATTTGTCGATGCAAACGAGCTTTGGTACTTTGAAAC TGGCACAGGCCATAAGTGGATTGCTTCAAAGATCCCACAAGATGAGTATTTTGTCACTGCAAACCAAGGCAGACTTCACG CTTATAAAGAAAATGATCCAAATTTCATGGGAGCAAAAGATGTCATCAAATTTGCGATCGACAACAAGACTTATGATCCT GCAAAAGATGGCGAATTTAACTTTACAAAGGCCTATACAAGGGATGATGAAAGAGATGTGACTTACAACTACCCACGTGT TTGCTGGGTGCAAAGTATGTTTAATCCAAGCCTAAAACAAGACTTCGCCGATGGTCAGAAATTCCCAGTATTTTTAAAAC CAGAGAAAAAACTAAGTATTGAAGATCTAAAAGCTGCGATGAGAGCCCACTATGACGGCACTGCGTTTGATAACTACGCT AGCAAAGATGAAGATAAGAAAAACATCTACCGTGCTATAAGCGTCTTTAGAACATACGAGTCTCACGTCATGCAGGTGCG CCCGTGGCTACCAAAAGAGATCGGCCGTGTGACATACGTCGCTCTTGGTATGGCTGATCTTAGCGTTTATTTGCCGTATT ACGAGGGGCTTGATGGCTTTATAAAAGGCTACTCAGATGGCTCATATGACGCTGATGACACTTCGATTTACTGGGTTTAT AGAAAGCTTCAAACCCTTGTGATGACTGATTATGAGAAGTATTCGCCAGTGGTAAAAGAGGCTTATGCTAAATTTGAAAA AGAGTTGGCGGTAAAACAGGCTAAATTTGAAGATGAGTATGTCAAACTTTATAAAAAAGATAAGAAAAAAGCGGACAAAC TCTTAAATGAATTTAGCCAAAAGACTATGCAAGAGGCTAAGGATTTAACCCAGGAGCTTACAAACAAGGTCTTTACCATG CTTACAGCCGATATGGACGCTAAGCTAAAATCCCTAAATAAAGGCAAAAAAGACTAA Protein sequence : MKGKILASVVAMSAILGTSSLACTTILVGDKASNDGSMLVARSADSKAIKAQVFLIHPATKNQTGMHSSKAHDGANDFTY PLPKDGMRYTTIANSHTKLHGAVGYNEAGVGLSGTETIYAKDELLKIDPYNEETGITEDDIPDVLLPRIKSAKEGVKLLG EIVETKGAGEGFGVVFVDANELWYFETGTGHKWIASKIPQDEYFVTANQGRLHAYKENDPNFMGAKDVIKFAIDNKTYDP AKDGEFNFTKAYTRDDERDVTYNYPRVCWVQSMFNPSLKQDFADGQKFPVFLKPEKKLSIEDLKAAMRAHYDGTAFDNYA SKDEDKKNIYRAISVFRTYESHVMQVRPWLPKEIGRVTYVALGMADLSVYLPYYEGLDGFIKGYSDGSYDADDTSIYWVY RKLQTLVMTDYEKYSPVVKEAYAKFEKELAVKQAKFEDEYVKLYKKDKKKADKLLNEFSQKTMQEAKDLTQELTNKVFTM LTADMDAKLKSLNKGKKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pipD | AAC33721.1 | dipeptidase homolog | Virulence | SPI-5 | Protein | 5e-86 | 51 |
| pipD | NP_455591.1 | putative secreted peptidase | Virulence | SPI-5 | Protein | 6e-103 | 49 |
| pipD | NP_460067.1 | pathogenicity island-encoded protein D | Virulence | SPI-5 | Protein | 3e-103 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CCC13826_1838 | YP_001465940.1 | S-layer-RTX protein | VFG0594 | Protein | 1e-103 | 49 |
