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Name : CCC13826_1178 (CCC13826_1178) Accession : YP_001466067.1 Strain : Campylobacter concisus 13826 Genome accession: NC_009802 Putative virulence/resistance : Unknown Product : type VI secretion protein Function : - COG functional category : S : Function unknown COG ID : COG3522 EC number : - Position : 134253 - 135611 bp Length : 1359 bp Strand : + Note : identified by match to protein family HMM PF05936; match to protein family HMM TIGR03353 DNA sequence : ATGAACGTTGATAAAGTTCATTTCGAGCAGCAAGAGAGGTATTTTGAGAGAAATTTAAACCTAAAAACCGTCTCGTCTTT TTCAAATTTATATGGAGTTTTGGAGCTTGAGATCTCAAGCGAGCTTTTGCTTCAAGGCAAGATAGGGCTAAATAAAATTT CTTGTATCTCGCAAGATGGTACGATATATAACGCCCCAGATCAAGACGACCTACCAGAGCCTCTTGAGATAAGCCCTAGC GAGCTAAATTCTGCTGTCATAGTGCTAAAGCTACCAGTTAGCTCAGGACTTGTTGATGTTAGCTTGCAAAACAACCTGCC AAATCTAAAATTTACAGCTAAACAAGCGCTCATTAGCTCAAGAGTGCATGATGAAGCTAGCAACGATATCTTGAACGAGC TAGATGACAAATACGACTTTGAGCTTTCATCTGCTTTTACGCAGGATAAAGAAAATTTGATCCTAGCAAGTCAAAGATCG ACTCTAGGAGTGCTTGGCTCAAAAACGCCTTATGAGCTTAGCGTGCCTGTTTGCAGGATAAAAAACATAGATCTAAACAA ACAAATAACGCTCGATGAGAAATTTATACCAACTTGCATTGATGTCAGTAAAAATTCTTTCATCACTAGCTTTATAGATG AGTTTAGCTTTGCTACAAAGCAGCATCAAGAGAGCTACACTGGGCTTTTAGGCGGTATAGATCAGGCTAAAAATAGGCTT GATATTTCAACATATTTGACGCTAAATATGCTTAAAAAATGGCACTTGATATTCTCCTATCTTTTTAAAAGAGACAAAAT TCATCCAGAGTATCTATATGAAAAGCTAATTGATTTTCAAGCTGATCTGCTAGCTCTAAGTCACGATGATAGTTTTAGCG AATTTATAGCTTATGATCACAACAACTTAAGTCAAACTTTTGTACCGCTAATAAACAATCTTAGGCTTTTGTTCTCGCAT ATCTTGTCGCCAAAATACGTCATGGCACAGATCGTTAAAAACAATCACGGCTTTTTTGACTGCGTCTTTGATAATCCAAG CATCATAGAAAACTCAGAAATTTACTTTGCTATCCATAGCGATACAAAAAATGAGTACCTGCTCAAAAATTTCAAAGAAC AGTGCAAAATTCACACCCAATCAAACATCAAAAGTATCGTCTCATCACAGCTTCGCGGCATAAATGTAGAGCAAATTTCA GCTATACCTAGTACATTGCCAAAGCTAAATGACTATATCTACTACAAGATCGATAAAAAAGATGAAATTTTTAAAAGCTT CGCAAATCAAAGCGTTATTAGCGTCTATATAACAGCAAATTTATCAAACGCTGACATTAAGATGTGGGCTTTATTATAA Protein sequence : MNVDKVHFEQQERYFERNLNLKTVSSFSNLYGVLELEISSELLLQGKIGLNKISCISQDGTIYNAPDQDDLPEPLEISPS ELNSAVIVLKLPVSSGLVDVSLQNNLPNLKFTAKQALISSRVHDEASNDILNELDDKYDFELSSAFTQDKENLILASQRS TLGVLGSKTPYELSVPVCRIKNIDLNKQITLDEKFIPTCIDVSKNSFITSFIDEFSFATKQHQESYTGLLGGIDQAKNRL DISTYLTLNMLKKWHLIFSYLFKRDKIHPEYLYEKLIDFQADLLALSHDDSFSEFIAYDHNNLSQTFVPLINNLRLLFSH ILSPKYVMAQIVKNNHGFFDCVFDNPSIIENSEIYFAIHSDTKNEYLLKNFKEQCKIHTQSNIKSIVSSQLRGINVEQIS AIPSTLPKLNDYIYYKIDKKDEIFKSFANQSVISVYITANLSNADIKMWALL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HH0250 | NP_859781.1 | hypothetical protein | Not tested | HHGI1 | Protein | 2e-113 | 51 |
