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Name : CCC13826_0468 (CCC13826_0468) Accession : YP_001467309.1 Strain : Campylobacter concisus 13826 Genome accession: NC_009802 Putative virulence/resistance : Virulence Product : glutamyl-tRNA synthetase (glutamate--tRNA ligase; GluRS) Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : 6.1.1.17 Position : 1475668 - 1476726 bp Length : 1059 bp Strand : - Note : identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993 DNA sequence : ATGAAAATTTTAGTAACTGGAACAGCTGGATTTATAGGATTTCACCTTGCAAATGCCCTTGTGGCGCGCGGGGATGAGGT CGTTGGGTATGACGTGATAAATGACTATTACGACGTAAATTTAAAGCTTGCACGCCTAAAAACGGCTGGCTTTGACGTGA GCGAGATAGACTATGGCAAGCTTATCACCTCAAAAATGCATCCAAATTTAAAATTTATAAAAGCAGACCTTGCTGATGAA AAGACGATGAAAGAGCTTTTTGAGAAGCAAAAATTTGACGTAGTGGTAAATTTAGCCGCACAAGCTGGCGTTCGCTACTC GCTTATAAATCCAAAAGCCTACATCGACAGCAACATCACAGGCTTTATGAACATCCTCGAGTGCTGCCGCCACAATGAGA TCAAAAATTTAGTCTATGCAAGCTCTAGCTCGGTTTATGGACTAAATGAAAACATGCCATTTTCTACGCACGAGGGGGTC AATCACCCTATAAGCCTCTACGCAGCGACCAAAAAGAGCAATGAGATGATGGCGCACACTTATAGCCACCTATTTAACGT GCCAACGACCGGACTTCGCTTTTTTACGGTTTATGGACCATGGGGACGCCCTGATATGGCGCTATTTTTGTTTGTTGATG CCGCGCTTAAAGATAAAACCATCGACGTCTTTAACTACGGCAAGATGAAGCGCGACTTTACCTACGTGGATGACATCGTA AAGGGCATCATCAAGTGCATCGACAACCCAGCTAAACCAAATCCAAACTGGGACGCAAAGCACCCAGACCCTGCCACTTC AAAAGCGCCGTTTAAGGTCTATAATATCGGCAACAACAGCCCAGTCGAGCTCATGGACTACATCAAGGCAGTTGAGATAA AGATCGGCCGCGAGATCAAGAAAAATTTTCTCCCACTTCAAGCAGGCGACGTGCCAGCGACATTTGCAGACGTGAGCGAC TTGGTGGCTGACTTTGACTACAAGCCAAATACAAAAGTAAACGACGGCGTGGCTAAATTTGTCGAGTGGTATAGCGAGTT TTATGGGATCAAAATTTAA Protein sequence : MKILVTGTAGFIGFHLANALVARGDEVVGYDVINDYYDVNLKLARLKTAGFDVSEIDYGKLITSKMHPNLKFIKADLADE KTMKELFEKQKFDVVVNLAAQAGVRYSLINPKAYIDSNITGFMNILECCRHNEIKNLVYASSSSVYGLNENMPFSTHEGV NHPISLYAATKKSNEMMAHTYSHLFNVPTTGLRFFTVYGPWGRPDMALFLFVDAALKDKTIDVFNYGKMKRDFTYVDDIV KGIIKCIDNPAKPNPNWDAKHPDPATSKAPFKVYNIGNNSPVELMDYIKAVEIKIGREIKKNFLPLQAGDVPATFADVSD LVADFDYKPNTKVNDGVAKFVEWYSEFYGIKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-100 | 60 |
