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Name : CCC13826_0461 (CCC13826_0461) Accession : YP_001467302.1 Strain : Campylobacter concisus 13826 Genome accession: NC_009802 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase subfamily protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 1469027 - 1470259 bp Length : 1233 bp Strand : - Note : identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026 DNA sequence : ATGAAAATAGCAGTAGTAGGACTTGGATATGTGGGACTTCCACTAGCAGCAGCTTTTAGTGAAAAGTACGAAGTAGTCGG CTTTGACGTAAATGCAAAACGTATAGAAGAGCTTAAAAGTGGTTATGACAGAACGCTTGAGCTTAGCAACGAGCAGATGA AAAAAGCGATTGATAATGGCATGAAATTTAGTCTAAATTTAGATGACATCAGAAGTTGCAACTTCTTCATCGTAACCGTC CCAACTCCGATAGATAAGAACAAGCGCCCTGACCTAACTCCAGTGGTAAAAGCGACTGAGAGCGTGGCAAAAGTGCTTAA AAAAGGCGACATCGTTGTCTATGAAAGCACCGTTTATCCAGGCGTTACAGAAGAAATTTGCGTGCCACTTCTTGAAAAAA GTGGGCTTAAATTTAACAAAGACTTCTTCTGCGGCTACTCTCCAGAGCGCATAAACCCAGGCGATAAAGAGCACACTGTT ACAAAGATCAAAAAGATCACAAGTGGCTCAACTCCAGAGATCGCAGACAAGGTCGATGAAATTTACCGCTCTATCATCAC AGCTGGCACTCACAAAGCTTCAAGCATCAAAGTAGCAGAGGCCGCAAAGGTCATCGAAAACACCCAACGCGACATCAACA TCGCCTTTATAAACGAGCTTGCGATGCTCTTTGAAAAGCTTCACATCAACACCATAGACGTTTTAGAAGCTGCAGGTACG AAGTGGAATTTCTTAAATTTCCGCCCAGGTCTAGTCGGCGGTCACTGCATCGGCGTAGATCCATACTATCTAACTCACAA AGCTCAAGAGGTAGGTTACAACCCTGAAATGATCCTAGCAGGTCGCCGTATCAACGATGATATGGGCAGATACGCAGCCG ATCAAGTAATAAAACTAATGATAAGAAAAGGTGTGCTTATCAACAAAGCGCGCGTGCTTGTTCTTGGTATGACATTTAAA GAAAACTGCCCAGATATAAGAAACTCTCGCGTTATAGACGTGGTTGATGAGCTAAAAGACTTTGGCTGCAAGGTTGATGT GACTGATCCTTGGGCTGATAGCGCTGAGGTAAAACACGAGTACGGCTTTGATCTAGTAAAAGAGTATAACATAGACGACT ACGACTGCATCGTGATCGCCGTAGCTCATAATGAATTTAAAAAGCTCAACCTAAAAGGCCACTTGGTTTATGATATAAAA AATATCTACCCAGAGGCTGACGCTAGGCTGTAA Protein sequence : MKIAVVGLGYVGLPLAAAFSEKYEVVGFDVNAKRIEELKSGYDRTLELSNEQMKKAIDNGMKFSLNLDDIRSCNFFIVTV PTPIDKNKRPDLTPVVKATESVAKVLKKGDIVVYESTVYPGVTEEICVPLLEKSGLKFNKDFFCGYSPERINPGDKEHTV TKIKKITSGSTPEIADKVDEIYRSIITAGTHKASSIKVAEAAKVIENTQRDINIAFINELAMLFEKLHINTIDVLEAAGT KWNFLNFRPGLVGGHCIGVDPYYLTHKAQEVGYNPEMILAGRRINDDMGRYAADQVIKLMIRKGVLINKARVLVLGMTFK ENCPDIRNSRVIDVVDELKDFGCKVDVTDPWADSAEVKHEYGFDLVKEYNIDDYDCIVIAVAHNEFKKLNLKGHLVYDIK NIYPEADARL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-123 | 60 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-123 | 60 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-111 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CCC13826_0461 | YP_001467302.1 | nucleotide sugar dehydrogenase subfamily protein | VFG0431 | Protein | 7e-124 | 60 |
