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Name : CCC13826_0450 (CCC13826_0450) Accession : YP_001467292.1 Strain : Campylobacter concisus 13826 Genome accession: NC_009802 Putative virulence/resistance : Virulence Product : Cpp29 Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG2148 EC number : - Position : 1456653 - 1457258 bp Length : 606 bp Strand : - Note : identified by match to protein family HMM PF02397 DNA sequence : ATGTATAGAAATTTTTTAAAGAGAGTGATCGACATTTTGGGAGCTTTATTTTTGCTCATTTTAACATCGCCCATCATCAT AGCAACGGCGATTTTTATCTATTTTAAGGTAAGCCGCGACGTCATTTTTACGCAGGCAAGACCAGGGCTTAATGAGAAAA TTTTTAAAATTTATAAATTTAAGACGATGAGCGATGAGCGTGACGCAAATGGCGAGCTCTTGCCAGATGATCAGCGTCTT GGCAAATTTGGCAAACTTATCCGCTCACTTAGCCTCGATGAGCTGCCACAGCTCTTTAACGTGCTAAAAGGCGATATGAG TTTTATCGGACCAAGGCCGCTTTTGGTTGAGTATCTACCCATCTATAACGAAACGCAAAAGCACCGCCACGACGTGCGCC CTGGTATCACGGGCCTAGCGCAGGTAAATGGCAGAAACGCCATAAGTTGGGAGAAAAAATTTGAATACGACGTCTATTAC GCTAAAAATTTAAGCTTTATGCTTGATGTAAAGATCGCCTTACAGACAATAGAAAAGGTGCTAAAACGAAGTGGTGTCAG CAAAGAGGGGCAGGCGACGACGGAGAAATTTAATGGCAAAAACTAA Protein sequence : MYRNFLKRVIDILGALFLLILTSPIIIATAIFIYFKVSRDVIFTQARPGLNEKIFKIYKFKTMSDERDANGELLPDDQRL GKFGKLIRSLSLDELPQLFNVLKGDMSFIGPRPLLVEYLPIYNETQKHRHDVRPGITGLAQVNGRNAISWEKKFEYDVYY AKNLSFMLDVKIALQTIEKVLKRSGVSKEGQATTEKFNGKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1N | AAL26667.1 | type 8 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-29 | 43 |
| SSP0070 | YP_300160.1 | capsular polysaccharide synthesis protein | Not tested | SCC15305cap | Protein | 1e-28 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CCC13826_0450 | YP_001467292.1 | Cpp29 | VFG1309 | Protein | 1e-31 | 43 |
| CCC13826_0450 | YP_001467292.1 | Cpp29 | VFG1369 | Protein | 2e-22 | 42 |
