|
Name : hslU (CCC13826_1222) Accession : YP_001466813.1 Strain : Campylobacter concisus 13826 Genome accession: NC_009802 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 952770 - 954092 bp Length : 1323 bp Strand : + Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGAACTTAACACCAAGAGAAATTGTTAAATTTTTAGATGACTATGTGATCGGTCAAAAGGACGCCAAAAAGATCATAGC GATCGCACTTCGCAACCGCTATCGCCGCATGAAGCTTGAAAAGAGCTTACAAGATGACATCATGCCAAAAAATATCTTGA TGATCGGCTCAACTGGCGTTGGTAAAACTGAGATCGCAAGGCGCCTTTCAAAGATGATGGGACTGCCTTTTATCAAGGTC GAGGCTAGCAAATATACCGAGGTTGGTTTTGTTGGTCGCGATGTTGAGAGCATGGTAAGAGACCTTGCTATGGCATCGTA TAATCTTGTAAAAAACGAGCAAAGCGAGAAAAACCAAGATAAAATCAACGCCTACATCGAAGAAAAGATCGTCTCAAAGC TACTTCCGCCACTGCCAAAAGGTGCTAGCGAAGAGAAGCAAGCAGAGTACGCTAAGAGCTATGACAAGATGCTAAATAGA CTAAGAAATGGCGAGCTTGACGAGCTAAGCATCGAGATAGAGGTGCAGCAAAACCCACTTGAAGCTGGCTCAAACGTGCC ACCTGACATGGCACAGATGCAAGAGAGCTTTATAAAGATAATTGGCATCGGTGGCAAGAACATCAAAAAAGAGATGAAGG TAAAAGACGCCAAAAAAGCTCTTCAAAGCGAGGCAAATGATAAAATTTTAGACCTTGAGAGCGTAAAAACTGAGGCTTTA AGAAGAGCTGAAAACGAGGGCATCATCTTTATAGACGAGATCGATAAGGTCGCTGTTGGCTCAGGTAGCTCAAACAGGCA AGATCCTAGCAAAGAAGGTGTGCAAAGAGACTTGCTACCTATCGTTGAGGGATCGAATGTAAATACTAAATTTGGAAATT TAAAGACAGATCACATTTTATTTATCGCAGCTGGCGCCTTTCATATAAGCAAGCCAAGCGATCTCATCCCAGAGCTGCAA GGCCGCTTCCCACTAAGGGTCGAGCTTGATAGCCTTGATGAGGATGCGCTTTATCAAATTTTAACTCAGCCAAAAAATTC GCTTTTAAAACAATATATCGCGCTTCTTTCAACTGAAAACGTCGAGCTAGAATTTGATGATGAAGCGATAAAAGAGATAG CAAGGATCGCTCACGCAGCAAATGAAAAGATGGAAGATATTGGTGCTAGACGCCTTCACACGGTGATCGAGCGTGTGATA GAAGATATCAGCTTTGAGGCTAGCGAAAAGAGCGGCGAGAAGATAAATGTGACAAAAGAGCTTGTAAAAGAGCGCCTAAA AGACGTGGTTGAGGATCAAGATCTAGCGAGGTACATACTTTGA Protein sequence : MNLTPREIVKFLDDYVIGQKDAKKIIAIALRNRYRRMKLEKSLQDDIMPKNILMIGSTGVGKTEIARRLSKMMGLPFIKV EASKYTEVGFVGRDVESMVRDLAMASYNLVKNEQSEKNQDKINAYIEEKIVSKLLPPLPKGASEEKQAEYAKSYDKMLNR LRNGELDELSIEIEVQQNPLEAGSNVPPDMAQMQESFIKIIGIGGKNIKKEMKVKDAKKALQSEANDKILDLESVKTEAL RRAENEGIIFIDEIDKVAVGSGSSNRQDPSKEGVQRDLLPIVEGSNVNTKFGNLKTDHILFIAAGAFHISKPSDLIPELQ GRFPLRVELDSLDEDALYQILTQPKNSLLKQYIALLSTENVELEFDDEAIKEIARIAHAANEKMEDIGARRLHTVIERVI EDISFEASEKSGEKINVTKELVKERLKDVVEDQDLARYIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 3e-135 | 65 |
