Gene Information

Name : EcE24377A_4891 (EcE24377A_4891)
Accession : YP_001465819.1
Strain : Escherichia coli E24377A
Genome accession: NC_009801
Putative virulence/resistance : Virulence
Product : GTPase
Function : -
COG functional category : R : General function prediction only
COG ID : COG3596
EC number : -
Position : 4878210 - 4879082 bp
Length : 873 bp
Strand : +
Note : identified by match to protein family HMM PF01926

DNA sequence :
ATGAATCCGTCTGATGCCATTGAGGCAATTGAAAAACCGCTCTCCTCCCTGCCTTACTCACTTTCCCGTCACATCCTGGA
ACATCTGCGCAAACTCACCAGTCACGAACCCGTGATTGGCATTATGGGTAAAAGCGGGGCCGGTAAATCCTCACTCTGTA
ATGCACTGTTTCAGGGGGAGGTCACCCCGGTCAGTGATGTTCACGCCGGCACCCGGGAAGTGCGGCGCTTCCGTCTGAGT
GGCCACGGTCACAGCATGATTATCACTGACCTGCCCGGGGTGGGCGAGAGCCGGGACAGGGATGCAGAGTATGAAGCCCT
GTACCGTGACATTCTGCCTGAACTTGACCTGGTACTGTGGCTGATTAAAGCCGATGACCGTGCCCTGTCTGTGGATGAGT
ATTTCTGGCGACACATCCTGCACCGGGGACATCAGCAGGTGCTGTTTGTGGTGACGCAGGCCGACAAAACGGAGCCCTGC
CATGAATGGGATATGGCCGGCATTCAGCCTTCTCCCGCACAGGCACAGAACATTCGTGAGAAAACAGATGCGGTATTCCG
GCTGTTCCGGCCCGTACATCCGGTTGTGGCCGTATCGGCCTGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCA
TGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGCCTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCT
CAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGCATTGCCTCTGTTGCCCG
TACGGTTCTGCGCGCCGTCCGTGACACGGTGGTCTCTGTTGCCCGCGCTGTATGGAACTGGATTTTCTTCTGA

Protein sequence :
MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGKSGAGKSSLCNALFQGEVTPVSDVHAGTREVRRFRLS
GHGHSMIITDLPGVGESRDRDAEYEALYRDILPELDLVLWLIKADDRALSVDEYFWRHILHRGHQQVLFVVTQADKTEPC
HEWDMAGIQPSPAQAQNIREKTDAVFRLFRPVHPVVAVSACTGWELDTLVSALMTALPDHAASPLMTRLQDELRTESVRS
QAREQFTGAVDRIFDTAESVCIASVARTVLRAVRDTVVSVARAVWNWIFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 4e-133 99
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 4e-133 99
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 4e-133 99
unnamed AAL99256.1 unknown Not tested LEE Protein 2e-131 98
Z1210 NP_286745.1 histone Not tested TAI Protein 2e-130 98
unnamed AAL08471.1 unknown Not tested SRL Protein 3e-133 98
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 2e-130 98
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 1e-132 98
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 6e-130 97
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 8e-130 97
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 1e-131 97
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 2e-130 97
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 5e-130 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcE24377A_4891 YP_001465819.1 GTPase VFG1062 Protein 2e-133 98
EcE24377A_4891 YP_001465819.1 GTPase VFG1674 Protein 6e-132 97
EcE24377A_4891 YP_001465819.1 GTPase VFG0654 Protein 3e-130 97