|
Name : EcE24377A_4879 (EcE24377A_4879) Accession : YP_001465808.1 Strain : Escherichia coli E24377A Genome accession: NC_009801 Putative virulence/resistance : Unknown Product : IS66 family transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 4868452 - 4870023 bp Length : 1572 bp Strand : - Note : identified by match to protein family HMM PF03050 DNA sequence : ATGGACACCTCACTTGCTCATGAGAACGCCCGCCTGCGGGCACTGTTGCAGACGCAACAGGACACCATACGCCAGATGGC TGAATACAACCGCCTGCTCTCACAGCGGGTGGCGGCTTATGCTTCCGAAATCAACCGGCTGAAGGCGCTGGTTGCGAAAC TGCAACGTATGCAGTTCGGTAAAAGCTCAGAAAAACTTCGTGCAAAAACCGAACGGCAGATACAGGAAGCACAGGAGCGA ATCAGCGCACTTCAGGAAGAAATGGCGGAAACGCTGGGTGAGCAATATGACCCGGTACTGCCATCCGCCCTGCGCCAGTC TTCAGCCCGTAAACCGTTACCGGCCTCACTTCCCCGTGAAACCCGGGTTATCCGGCCGGAAGAGGAATGCTGTCCTGCCT GTGGTGGTGAACTCAGTTCTCTGGGATGTGATGTGTCAGAGCAACTGGAGCTTATCAGCAGCGCCTTTAAGGTTATCGAA ACACAACGTCCGAAACAGGCCTGTTGCCGGTGCGACCATATCGTGCAGGCACCAGTACCTTCAAAACCCATTGCACGCAG TTATGCCGGAGCGGGGCTTCTGGCCCATGTTGTCACCGGGAAATATGCAGACCATCTGCCGTTATACCGCCAGTCAGAAA TATACCGTCGTCAGGGAGTGGAGCTGAGCCGTGCCACACTGGGGCGCTGGACAGGTGCTGTTGCTGAACTGCTGGAGCCG CTGTATGACGTCCTGCGCCAGTATGTGCTGATGCCCGGTAAAGTCCATGCTGATGATATCCCCGTCCCGGTCCAGGAGCC GGGCAGCGGTAAAACCCGGACAGCCCGGCTGTGGGTCTACGTCCGTGATGACCGTAACGCCGGTTCACAGATGCCCCCGG CGGTCTGGTTCGCGTACAGTCCGGACCGGAAAGGTATCCATCCACAAAATCACCTGGCCGGTTACAGCGGTGTGCTTCAG GCCGATGCTTACGGTGGTTACCGGGCGTTATACGAATCCGGCAGAATAACGGAAGCCGCGTGTATGGCTCATGTCCGGAG AAAAATCCACGATGTGCATGCAAGAGCGCCCACCTACATCACCACGGAAGCCCTGCAGCGTATCGGTGAACTGTATGCCA TCGAGGCAGAGGTCCGGGGCTGTTCAGCAGAACAGCGTCTGGCGGCAAGAAAAGCCAGAGCCGCGCCACTGATGCAGTCA CTGTATGACTGGATACAGCAACAGATGAAAACACTGTCGCGTCACTCAGATACGGCAAAAGCGTTCGCATACCTGCTGAA ACAGTGGGATGCACTGAACGTGTACTGCAGTAATGGCTGGGTGGAAATCGACAACAACATCGCAGAGAACGCCTTACGGG GAGTGGCCGTAGGCCGGAAAAACTGGATGTTCGCGGGTTCCGACAGCGGTGGTGAACATGCGGCGGTGTTGTACTCGCTG ATCGGCACATGCCGTCTGAACAATGTGGAGTCAGAAAAGTGGCTGCGTTACGTCATTGAACATATCCAGGACTGGCCGGC AAACCGGGTACGCGATCTGTTGCCCTGGAAAGTTGATCTGAGCTCTCAGTAA Protein sequence : MDTSLAHENARLRALLQTQQDTIRQMAEYNRLLSQRVAAYASEINRLKALVAKLQRMQFGKSSEKLRAKTERQIQEAQER ISALQEEMAETLGEQYDPVLPSALRQSSARKPLPASLPRETRVIRPEEECCPACGGELSSLGCDVSEQLELISSAFKVIE TQRPKQACCRCDHIVQAPVPSKPIARSYAGAGLLAHVVTGKYADHLPLYRQSEIYRRQGVELSRATLGRWTGAVAELLEP LYDVLRQYVLMPGKVHADDIPVPVQEPGSGKTRTARLWVYVRDDRNAGSQMPPAVWFAYSPDRKGIHPQNHLAGYSGVLQ ADAYGGYRALYESGRITEAACMAHVRRKIHDVHARAPTYITTEALQRIGELYAIEAEVRGCSAEQRLAARKARAAPLMQS LYDWIQQQMKTLSRHSDTAKAFAYLLKQWDALNVYCSNGWVEIDNNIAENALRGVAVGRKNWMFAGSDSGGEHAAVLYSL IGTCRLNNVESEKWLRYVIEHIQDWPANRVRDLLPWKVDLSSQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec53 | AAW51736.1 | Aec53 | Not tested | AGI-3 | Protein | 0.0 | 99 |
| c3563 | NP_755438.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 8e-115 | 67 |
| ECO103_3554 | YP_003223421.1 | hypothetical protein | Not tested | LEE | Protein | 2e-138 | 64 |
| Z4317 | NP_289543.1 | hypothetical protein | Not tested | OI-122 | Protein | 8e-139 | 64 |
| st57 | CAC81895.1 | ST57 protein | Not tested | LEE II | Protein | 8e-127 | 61 |
| unnamed | AAC31494.1 | L0015 | Not tested | LEE | Protein | 1e-131 | 60 |
| Z5098 | NP_290249.1 | prophage-associated protein | Not tested | LEE | Protein | 1e-131 | 60 |
| unnamed | CAC39285.1 | hypothetical protein | Not tested | LPA | Protein | 1e-131 | 60 |
| tnp | AEA34686.1 | transposase | Not tested | Not named | Protein | 1e-132 | 60 |
| ECs4547 | NP_312574.1 | hypothetical protein | Not tested | LEE | Protein | 2e-131 | 60 |
| unnamed | ACU09439.1 | IS66 family element transposase | Not tested | LEE | Protein | 2e-131 | 60 |
| Z4337 | NP_289562.1 | hypothetical protein | Not tested | OI-122 | Protein | 1e-131 | 60 |
| Z1131 | NP_286666.1 | hypothetical protein | Not tested | TAI | Protein | 7e-131 | 59 |
| Z1570 | NP_287074.1 | hypothetical protein | Not tested | TAI | Protein | 7e-131 | 59 |
| unnamed | AAL57570.1 | unknown | Not tested | LEE | Protein | 8e-132 | 59 |
| unnamed | CAI43806.1 | hypothetical protein | Not tested | LEE | Protein | 2e-131 | 59 |
| unnamed | AAL08460.1 | unknown | Not tested | SRL | Protein | 3e-92 | 58 |
| Z4340 | NP_289564.1 | hypothetical protein | Not tested | OI-122 | Protein | 1e-110 | 54 |
| Z1600 | NP_287104.1 | hypothetical protein | Not tested | TAI | Protein | 2e-110 | 54 |
| Z1161 | NP_286696.1 | hypothetical protein | Not tested | TAI | Protein | 2e-110 | 54 |
| BCAM0248 | YP_002232880.1 | putative transposase | Not tested | BcenGI11 | Protein | 2e-119 | 53 |
| tnp | AEA34687.1 | IS66 family transposase | Not tested | Not named | Protein | 1e-72 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EcE24377A_4879 | YP_001465808.1 | IS66 family transposase | VFG1700 | Protein | 4e-115 | 67 |
| EcE24377A_4879 | YP_001465808.1 | IS66 family transposase | VFG0793 | Protein | 6e-132 | 60 |
| EcE24377A_4879 | YP_001465808.1 | IS66 family transposase | VFG1051 | Protein | 2e-92 | 58 |
| EcE24377A_4879 | YP_001465808.1 | IS66 family transposase | VFG1736 | Protein | 1e-90 | 54 |
