|
Name : EcE24377A_4877 (EcE24377A_4877) Accession : - Strain : Escherichia coli E24377A Genome accession: NC_009801 Putative virulence/resistance : Unknown Product : - Function : - COG functional category : - COG ID : - EC number : - Position : 4866619 - 4868003 bp Length : 1385 bp Strand : - Note : IS66 family element, transposase, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF03050 DNA sequence : ATGAACGAAATCTCTTCTGACGACATCTTCCTGCTGAAACAGCGCCTGGCCGAACAGGAAGCGCTGATCCACGCCCTGCA GGAAAAGCTGAGCAACCGGGAGCGCGAAATAGACATCTGCAGGCGCAGCTGGATAAACTCCGCCGGATGAACTTCGGCAG TCGTTCCGAAAAAGTCTCCCGCCGTATCGCACAAATGGAAGCCGATCTGAACCGGCTTCAGAAAGAGAGCGATACGCTGA CTGGTAGGGTGTATGACCCGGCAGTACAGCGTCCGTTGCGTCAGACCCGCACCCGTAAGCCGTTCCCTGAATCACTACCC CGTGACGAAAAGCGACTGTTGCCTGCGGCGCCGTGCTGCCCGAACTGCGGCGGTTCACTGAGCTATCTGGGCGAGGATAC CGCCGAACAGCTGGAGTTGATGCGTAGCGCCTTCCGGGTTATCCGGACGGTACGGGAAAAACATGCCTGTACTCAGTGCG ATGCCATCGTGCAGGCACCTGCACCTTCGCGGCCCATCGAGCGGGGTATCGCCGGACCGGGGCTGCTGGCCCGCGTGCTG ACCTCGAAGTATGCAGAGCACACCCCGCTGTATTGCCAGTCAGAAATATACGGCCGGCAAGGTGTGGAGCTGAGCCGTTC ACTGCTGTCGGGCTGGGTGGATGCATGCTGCCGGCTGCTGTCTCCGCTGGAAGAGGCGCTTCATGGCTATGTCATGACTG ACGGCAAACTCCATGCCGATGATACCCCGGTCCAGGTACTGCTGCCGGGTAATAAGAAGACGAAGACCGGGCGGTTGTGG GCGTATGTTCGTGATGACCGCAATGCCGGGTCAGCGTTGGCACCTGCAGTGAGGTTCGCTTACAGCCCGGACAGAAAAGG CATCCATCCGCAGACTCATCTTGCTTGCTTCAGCGGTGTGCTGCAAGCGGATGCGTACGCCGGGTTCAACGAGCTGTATC GCAATGGTGGGATAACGGAAGCTGCCTGCTGGGCTCATGCCCGCCGAAAGATCCACGATGTGCACGTCCGCATCCCGTCA GCACTGACGGAAGAAGCCCTGGAGCAGATCGGTCAGTTGTACGCCATAGAGGCGGATATAAGGGGAATGCCGGCAGAGCA GCGGCTTGCTGAACGTCAGCGAAAAACGAAACCGCTGTTGAAATCCCTGGAAAGCTGGTTGCGTGAAAAGATGAAGACCC TGTTCTTCGGCTCTGGCCATGGTGGTGAGCGGGGAGCGCTACTGTACAGCCTGATCGGGACGTGCAAACTGAATGACGTG GATCCAGAAAGCTACCTTCGCCATGTGCCTGGCGTCATAGCAGACTGGCCGGTCAACCGGGTCAGCGAACTGCTTCCGTG GCGCATAGCACTGCCAGCTGAATAA Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08460.1 | unknown | Not tested | SRL | DNA | 0.0 | 99.6 |
| unnamed | CAC39285.1 | hypothetical protein | Not tested | LPA | DNA | 0.0 | 99.4 |
| st57 | CAC81895.1 | ST57 protein | Not tested | LEE II | DNA | 0.0 | 99.4 |
| l0015 | CAD33775.1 | L0015 protein | Not tested | PAI I 536 | DNA | 0.0 | 99.3 |
| unnamed | AAC31494.1 | L0015 | Not tested | LEE | DNA | 0.0 | 99.3 |
| Z4337 | NP_289562.1 | hypothetical protein | Not tested | OI-122 | DNA | 0.0 | 99.3 |
| Z5098 | NP_290249.1 | prophage-associated protein | Not tested | LEE | DNA | 0.0 | 99.3 |
| unnamed | - | - | Not tested | LEE | DNA | 0.0 | 99.3 |
| unnamed | AAL57570.1 | unknown | Not tested | LEE | DNA | 0.0 | 99.3 |
| unnamed | CAI43806.1 | hypothetical protein | Not tested | LEE | DNA | 0.0 | 99.3 |
| ECO26_5299 | - | - | Not tested | LEE | DNA | 0.0 | 99.3 |
| tnp | AEA34686.1 | transposase | Not tested | Not named | DNA | 0.0 | 99.2 |
| Z1131 | NP_286666.1 | hypothetical protein | Not tested | TAI | DNA | 0.0 | 99.2 |
| Z1570 | NP_287074.1 | hypothetical protein | Not tested | TAI | DNA | 0.0 | 99.2 |
| ECs4547 | NP_312574.1 | hypothetical protein | Not tested | LEE | DNA | 0.0 | 99.2 |
| unnamed | ACU09439.1 | IS66 family element transposase | Not tested | LEE | DNA | 0.0 | 99.1 |
