Gene Information

Name : EcE24377A_4872 (EcE24377A_4872)
Accession : -
Strain : Escherichia coli E24377A
Genome accession: NC_009801
Putative virulence/resistance : Unknown
Product : -
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4862749 - 4863252 bp
Length : 504 bp
Strand : +
Note : IS1, transposase orfB, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error; identified by match to protein family HMM PF03400

DNA sequence : 
ATGTCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTTTTACGTCACTTAAAAAACTCAGGTCGCAGTCGGT
AACCTCGCGCATACAACCGGGCAGTGATGTGATTGTCTGCGCTGAAATGGACGAACAGTGGGGCTACGTCGGTGCTAAAT
CACGTCAGCGCTGGCTGTTTTACGCGTATGACAGGATACGGAGGACGGTTGTGGCGCACGTCTTCGGTGAACGCACTCTG
GCCACACTGGAGCGTCTTCTGAGCCTGCTGTCGGCCTTTGAGGTCGTGGTATAGATGACGGATGGCTGGCCGCTGTATGA
ATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGAC
AACATCTGGCAAGGCTGGGACGGAAGTCACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGTCATCGGGCATTAT
CTGAACATAAAACACTATCAGTAA

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI DNA e-287 99.6
aec38 AAW51721.1 InsB Not tested AGI-3 DNA e-256 99.6
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI DNA e-287 99.6
tnpH AAD44742.1 TnpH Not tested SHI-2 DNA e-285 99.2
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 DNA e-222 99.2
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 DNA e-284 99
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 DNA e-278 97.8
insB ADD91744.1 transposase Not tested PAI-I AL862 DNA e-253 94.7
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 DNA e-229 91.3
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 DNA e-229 91.3
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 DNA e-229 91.3
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 DNA e-218 91.2