|
Name : EcE24377A_3432 (EcE24377A_3432) Accession : YP_001464429.1 Strain : Escherichia coli E24377A Genome accession: NC_009801 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0810 EC number : - Position : 3439337 - 3443857 bp Length : 4521 bp Strand : - Note : identified by glimmer DNA sequence : TTGAGTGCAACCCTGTTAGCCGGTTGTGATGGCGGTGGCTCCGGATCTTCCTCCGATACGCCGCCTGTAGATTCTGGAAC AGGGTCTTTGCCGGAAGTGAAACCTGATCCAACACCAAACCCGGAGCCGACGCCTGAGCCAACGCCGGACCCAGAACCTA CGCCGGAACCGACACCTGATCCTGAGCCAACACCAGAACCGGAGCCAGAACCTGTTCCTACGAAAACGGGTTATCTGACT CTGGGCGGAAGCCTGCGGGTAACTGGTGATATCACCTGTAATGATGAATCCAGCGATGGCTTTACCTTTACACCAGGCGA CAAAGTCACCTGTGTGGCAGGGAACAACACGACAATTGCTACCTTCGACACCCAGTCAGAAGCTGCGCGTAGCCTGCGTG CGGTTGAAAAAGTGTCGTTTAGTCTTGAGGACGCGCAAGAACTGGCGGGTTCCGACAACAAGAAAAGCAATGCGCTCTCG CTGGTCACCTCCATGAACAGTTGCCCGGCGAATACAGAACAGGTGTGCCTGGAGTTCTCCTCGGTGATCGAGAGTAAACG TTTCGACTCGCTGTATAAGCAAATCGATCTGGCACCGGAAGAATTCAAAAAGCTGGTCAATGAAGAGGTGGAAAACAATG CCGCGACCGATAAAGCGCCATCCACTCATACTTCACCGGTCGTGCCCGCCACCACTCCGGGAACAAAACCGGATCTAAAC GCTTCCTTCGTGTCGGCTAACGCGGAACAGTTTTATCAGTATCAACCCACTGAAATCATTCTCTCTGAAGGTCGACTGGT CGATAGTCAGGGGGATGGTGTTGTTGGTGTCAACTATTACACCAATTCCGGCCGTGGTGTAACCGGAGAAAACGGGGAAT TTTCCTTTAGTTGGGGGGAAACCATCTCCTTTGGCATCGACACTTTTGAGCTTGGTTCTGTGCGTGGTAACAAGTCGACT ATTGCATTGACTGAACTGGGTGATGAAGTTCGCGGGGCAAATATCGATCAGTTGATTCACCGCTATTCGAAGGCTGGACA AAATCACACGCGTGTAGTTCCGGATGAAGTGCGCAAGGTTTTTGCTGAATATCCCAACGTGATTAACGAGATTATCAATC TCTCGTTATCCAATGGTGCGACGCTGGGGGAAGGTGAGCAAGTCGTTAATCTGCCTAACGAATTTATCGAGCAGTTTAAG ACGGGTCAGGCCAAAGAGATCGATACCGCGATTTGTGCGAAAACCGATGGTTGTAACGAGGCTCGCTGGTTCTCGCTGAC AACGCGCAATGTTAATGACGGCAAGATTCAGGGCGTTATCAACAAGCTGTGGGGCGTGGATACGAACTACAAATCTGTCA GTAAGTTCCATGTATTCCATGACTCTACCAACTTCTATGGCAGCACGGGTAATGCGCGCGGTCAGGCGGTGGTGAATATC TCCAACGCGGCCTTCCCGATTCTGATGGCGCGTAATGATAAAAACTACTGGCTGGCGTTTGGCGAAAAACGCGCCTGGGA TAAAAATGAGCTGGCGTACATTACTGAAGCGCCTTCCATTGTGCGACCAGAGAACGTGACACGCGAAACCGCCACCTTCA ACCTGCCGTTTATCTCGCTGGGGCAAGTGGGCGATGGCAAGCTGATGGTTATCGGTAACCCACACTACAACAGCATCCTG CGTTGCCCGAACGGCTACAGCTGGAACGGGGGCGTTAATAAAGACGGACAGTGTACGCTCAACAGCGACCCGGATGACAT GAAGAACTTCATGGAGAACGTGCTGCGCTATCTGTCCGACGATAAATGGACGCCGGACGCGAAAGCCAGCATGACCGTAG GCACCAACCTGGATACTGTCTATTTTAAACGTCATGGTCAGGTTACAGGAAACAGCGCTGCGTTCGACTTCCATCCGGAT TTTGCGGGCATCTCTGTTGAGCATTTAAGTAGCTATGGCGATCTCGATCCGCAGGAAATGCCGCTGCTGATCCTTAACGG CTTTGAATATGTGACTCAGGTGGGTAACGATCCTTATGCAATCCCGCTGCGTGCAGATACCAGCAAACCGAAGCTGACTC AGCAGGATGTGACCGATCTGATCGCCTATCTGAACAAAGGTGGATCGGTGCTGATCATGGAAAACGTGATGAGCAATCTT AAGGAAGAGAGCGCGTCTGGTTTTGTGCGTCTGTTGGATGCCGCAGGTCTGTCGATGGCACTGAACAAGTCGGTAGTAAA TAACGATCCGCAAGGGTATCCGAACCGCGTTCGTCAACGACGTTCAACGCCAATTTGGGTCTATGAGCGTTATCCGGCTG TCGATGGTAAACCACCGTATACCATTGATGACACCACGAAAGAAGTTATCTGGAAATATCAGCAAGAAAACAAACCTGAT GACAAACCGAAGCTGGAAGTTGCCAGCTGGCAGGAAGAAGTTGAGGGTAAACAGGTAACCCAATTCGCCTTTATTGATGA AGCCGACCACAAAACGCCTGAGTCACTGGCTGCGGCAAAACAGAGAATTCTGGACGCGTTCCCAGGGCTGGAAGTGTGTA AGGATTCTGACTACCACTATGAGGTCAACTGTCTGGAATACCGCCCAGGCACGGATGTGCCGGTAACCGGTGGCATGTAT GTTCCGCAGTATACGCAGCTGGATCTGAGTGCCGACACCGCGAAAGCGATGCTGCAGGCTGCGGATTTAGGCACCAATAT TCAGCGCCTGTATCAGCATGAGCTTTATTTCCGTACCAATGGCCGCCAGGGTGAGCGTCTCAACAGCGTTGATCTGGAAC GTTTATACCAAAACATGTCCGTCTGGCTGTGGAACGAGACGAAATATCGTTATGAAGAGGGTAAAGAAGACGAGCTGGGC TTTAAAACGTTCACTGAGTTTCTGAACTGCTACACCAACAATGCATACGTTGGCACGCAGTGTTCTGCTGAGCTGAAAAA ATCGCTGATCGATAACAAGATGATTTATGGTGAAGAAAGCAGCAAAGCGGGCATGATGAACCCGAGCTACCCGCTCAACT ATATGGAAAAACCGCTGACACGCCTGATGCTGGGCCGTTCCTGGTGGGATCTGAACATCAAAGTTGATGTTGAGAAGTAT CCGGGAGTGGTGAATACAAACGGCGAAACCGTCACACAAAACATTAACTTGTACTCAGCTCCAACCAAATGGTTTGCAGG TAACATGCAGTCAACTGGCCTGTGGGCACCTGCCCAGCAGGAAGTCAGCATTGAGTCAAAGGCGACAGTTCCTGTGACCG TGACTGTTGCGCTGGCCGACGACCTGACAGGACGAGAGAAGCATGAAGTTAGCCTGAATCGTCCACCCAGAGTGACAAAA ACCTATGACCTGAAAGCCAATGATAAGGTGACGTTCAAAGTCCCTTACGGTGGTCTGATTTACATCAAGGGCGACAGCAA AGAGGTGCAATCAGCTGACTTCACCTTTACCGGTGTAGTAAAAGCGCCGTTCTATAAAGACGGTAAGTGGCAACACGATC TGAACTCCCCTGCCCCGCTGGGCGAACTGGAGTCTGCCTCGTTCGTCTATACCACACCGAAGAAGAACCTGAATGCCAGC AATTACACTGGCGGACTGGAGCAATTCGCTAACGATCTGGATACCTTTGCCAGCTCGATGAATGACTTCTACGGCCGTGA TAGCGAAGACGGTAAGCACCGGATGTTTACCTATAAAAACTTGCCGGGCCACAAACATCGTTTCGCCAACGATGTGCAGA TCTCCATCGGTGATGCGCATTCGGGTTATCCGGTAATGAACAGCAGCTTCTCGCCGAACAGCACCACGCTGCCGACGACG CCGCTGAACGACTGGCTGATCTGGCATGAAGTCGGTCATAACGCCGCAGAAACGCCGTTGACTGTACCGGGTGCAACTGA AGTCGCTAACAACGTGCTGGCGCTGTACATGCAGGATCGTTATCTCGGCAAGATGAACCGTGTCGCTGACGATATTACCG TCGCACCGGAATATCTGGAGGAAAGCAACGGTCAGGCATGGGCGCGCGGCGGTGCGGGTGACCGTCTGCTGATGTACGCA CAGCTGAAGGAATGGGCAGAGAAAAACTTTGATATCAAGAAATGGTATCCAGATGGCACTCCTCTGCCAGAGTTTTACAG CGAGCGTGAAGGGATGAAAGGCTGGAACCTGTTCCAGTTGATGCATCGTAAAGCACGCGGCGATGAGGTCAGCAATGACA AGTTTGGCGGCAAGAATTACTGTGCTGAATCCAACGGTAACGCAGCGGACACGCTGATGCTGTGTGCCTCCTGGGTCGCC CAGACGGATCTTTCGGAGTTCTTTAAGAAATGGAATCCGGGTGCGAATGCTTACCAGCTGCCGGGGGCGAGCGAGATGAG CTTCGAGGGCGGTGTGAGCCAGTCGGCGTACAACACGCTGGCGTCACTCAAGCTGCCGAAACCGGAACAGGGACCGGAAA CCATTAACAAGGTTACCGAGCATAAGATGTCTGTCGAGTAA Protein sequence : MSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTPEPTPDPEPTPEPTPDPEPTPEPEPEPVPTKTGYLT LGGSLRVTGDITCNDESSDGFTFTPGDKVTCVAGNNTTIATFDTQSEAARSLRAVEKVSFSLEDAQELAGSDNKKSNALS LVTSMNSCPANTEQVCLEFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTSPVVPATTPGTKPDLN ASFVSANAEQFYQYQPTEIILSEGRLVDSQGDGVVGVNYYTNSGRGVTGENGEFSFSWGETISFGIDTFELGSVRGNKST IALTELGDEVRGANIDQLIHRYSKAGQNHTRVVPDEVRKVFAEYPNVINEIINLSLSNGATLGEGEQVVNLPNEFIEQFK TGQAKEIDTAICAKTDGCNEARWFSLTTRNVNDGKIQGVINKLWGVDTNYKSVSKFHVFHDSTNFYGSTGNARGQAVVNI SNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSIVRPENVTRETATFNLPFISLGQVGDGKLMVIGNPHYNSIL RCPNGYSWNGGVNKDGQCTLNSDPDDMKNFMENVLRYLSDDKWTPDAKASMTVGTNLDTVYFKRHGQVTGNSAAFDFHPD FAGISVEHLSSYGDLDPQEMPLLILNGFEYVTQVGNDPYAIPLRADTSKPKLTQQDVTDLIAYLNKGGSVLIMENVMSNL KEESASGFVRLLDAAGLSMALNKSVVNNDPQGYPNRVRQRRSTPIWVYERYPAVDGKPPYTIDDTTKEVIWKYQQENKPD DKPKLEVASWQEEVEGKQVTQFAFIDEADHKTPESLAAAKQRILDAFPGLEVCKDSDYHYEVNCLEYRPGTDVPVTGGMY VPQYTQLDLSADTAKAMLQAADLGTNIQRLYQHELYFRTNGRQGERLNSVDLERLYQNMSVWLWNETKYRYEEGKEDELG FKTFTEFLNCYTNNAYVGTQCSAELKKSLIDNKMIYGEESSKAGMMNPSYPLNYMEKPLTRLMLGRSWWDLNIKVDVEKY PGVVNTNGETVTQNINLYSAPTKWFAGNMQSTGLWAPAQQEVSIESKATVPVTVTVALADDLTGREKHEVSLNRPPRVTK TYDLKANDKVTFKVPYGGLIYIKGDSKEVQSADFTFTGVVKAPFYKDGKWQHDLNSPAPLGELESASFVYTTPKKNLNAS NYTGGLEQFANDLDTFASSMNDFYGRDSEDGKHRMFTYKNLPGHKHRFANDVQISIGDAHSGYPVMNSSFSPNSTTLPTT PLNDWLIWHEVGHNAAETPLTVPGATEVANNVLALYMQDRYLGKMNRVADDITVAPEYLEESNGQAWARGGAGDRLLMYA QLKEWAEKNFDIKKWYPDGTPLPEFYSEREGMKGWNLFQLMHRKARGDEVSNDKFGGKNYCAESNGNAADTLMLCASWVA QTDLSEFFKKWNPGANAYQLPGASEMSFEGGVSQSAYNTLASLKLPKPEQGPETINKVTEHKMSVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAE85238.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 0.0 | 88 |
| VC0395_A0370 | YP_001216326.1 | lipoprotein | Not tested | VPI-1 | Protein | 0.0 | 50 |
| acfD | AAK20802.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| VC0845 | NP_230493.1 | hypothetical protein | Not tested | VPI-1 | Protein | 0.0 | 49 |
| acfD | ACK75655.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75652.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75649.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75646.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75664.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75670.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75667.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75658.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75661.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EcE24377A_3432 | YP_001464429.1 | hypothetical protein | VFG0106 | Protein | 0.0 | 49 |
