Gene Information

Name : EcE24377A_3416 (EcE24377A_3416)
Accession : YP_001464413.1
Strain : Escherichia coli E24377A
Genome accession: NC_009801
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3424821 - 3425666 bp
Length : 846 bp
Strand : +
Note : identified by similarity to GB:BAB34832.1

DNA sequence :
ATGTCAAACATCACAATCTCCCATCCGGAAGTGGTCACCGGGCATACGGACGTTATCTGCTCAACCAGTATCCGCCACAT
TCTGGCTGTACGAAAGAGTATACTGCTGCAAATCGACACACTTATCCGGCAACTGGCTGAAATCTCAGCAATGACAGAAA
GTATTGGCGGTAAAACCGCCCCGGACTGGGCCATGAAACAGGATTTTCGCTGTGGCTGCTGGCTCATGGAGAAACCTGAA
ACAGCAATGAAAGCCATCACCCGCAACCTTGACCGCGAAATCTGGCGTGATCTGATGCAACGTTCAGGGATGCTGTCATT
AATGGATGCACAAGCCCGTGATACATGGTACCGGTCACTGGAGTACGATAATTTTCCGGAAATCAGTGAAGCGAACATTC
TGAGCACATTTGAACAACTGCACCAGAATAAGGATGAGGTGTTTGAGCGGGGGGTGATCAACGTCTTCAGGGGACTGAGC
TGGAATTACAAAACCAATTCACCCTGCAAATTTGGCAGTAAAATTATCGTCAACAACCTGGTGAGGTGGGACCGGTGGGG
GTTTCATCTTATCACCGGGCAACAGGCTGATCGACTTGCCGATCTGGAAAGAATGCTACACCTGTTCAGCGGCAAACCGA
TCCCCGACAACCGGGAAAACATCACTATTCGTCTGGATGAGCACATCCAGTCTGTTCAGGGTAAAGAGGACTATGAAGAT
GAGATATTCAGCATCAGATACTTTAAGAAGGGCTCCGCGCACATCACGTTCAGGAAACCAGAGCTGATTGACAGGCTTAA
TGATATTATTGCGAAATACTATCCAAATGTATTGACCGAAAGGTAA

Protein sequence :
MSNITISHPEVVTGHTDVICSTSIRHILAVRKSILLQIDTLIRQLAEISAMTESIGGKTAPDWAMKQDFRCGCWLMEKPE
TAMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYRSLEYDNFPEISEANILSTFEQLHQNKDEVFERGVINVFRGLS
WNYKTNSPCKFGSKIIVNNLVRWDRWGFHLITGQQADRLADLERMLHLFSGKPIPDNRENITIRLDEHIQSVQGKEDYED
EIFSIRYFKKGSAHITFRKPELIDRLNDIIAKYYPNVLTER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 5e-125 94
unnamed AAL57572.1 unknown Not tested LEE Protein 6e-124 94
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 5e-125 94
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 5e-123 94
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 3e-123 93
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 1e-123 92
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 2e-121 92
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 1e-120 90
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 2e-121 90
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 2e-121 90
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 2e-121 90
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 4e-120 89
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 6e-120 89
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 9e-120 89
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 7e-111 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcE24377A_3416 YP_001464413.1 hypothetical protein VFG1533 Protein 1e-121 92
EcE24377A_3416 YP_001464413.1 hypothetical protein VFG0666 Protein 9e-122 90
EcE24377A_3416 YP_001464413.1 hypothetical protein VFG1685 Protein 4e-111 89