Gene Information

Name : EcE24377A_3415 (EcE24377A_3415)
Accession : YP_001464412.1
Strain : Escherichia coli E24377A
Genome accession: NC_009801
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3424494 - 3424736 bp
Length : 243 bp
Strand : +
Note : identified by match to protein family HMM PF06117

DNA sequence :
ATGCCTGCCGGGTTTACCCACGTTCAACTGGTAACCAGGAACAACATGAAATCATTAACCACGGAAACAGCGCTGGATAT
TCTGATTGCATGGCTGCAGGACAATATCGACTGCGAATCGGAAATTATCTTTGACAACGATGAGGATAAAACGGATTCGG
CAGCACTGCTGCCCTGCATTGAACAGGCCAGGGAAGATATCCATACCCTGCGCCAGTTGCAGTTTCTGCACCAGAACCGG
TGA

Protein sequence :
MPAGFTHVQLVTRNNMKSLTTETALDILIAWLQDNIDCESEIIFDNDEDKTDSAALLPCIEQAREDIHTLRQLQFLHQNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec78 AAW51761.1 Aec78 Not tested AGI-3 Protein 8e-25 98
unnamed CAI43905.1 hypothetical protein Not tested LEE Protein 2e-24 96
unnamed AAL57573.1 unknown Not tested LEE Protein 9e-24 95
unnamed AAK00484.1 unknown Not tested SHI-1 Protein 4e-22 94
SF3001 NP_708775.1 hypothetical protein Not tested SHI-1 Protein 6e-22 94
unnamed CAI43850.1 hypothetical protein Not tested LEE Protein 3e-28 93
unnamed CAD66209.1 hypothetical protein Not tested PAI III 536 Protein 1e-28 93
ECO103_3594 YP_003223451.1 hypothetical protein Not tested LEE Protein 6e-21 93
z1225 CAD33791.1 Z1225 protein Not tested PAI I 536 Protein 5e-29 93
ECO111_3780 YP_003236115.1 hypothetical protein Not tested LEE Protein 4e-22 93
unnamed ADD91697.1 hypothetical conserved protein Not tested PAI-I AL862 Protein 5e-28 92
unnamed AAL08480.1 unknown Not tested SRL Protein 5e-22 91
Z1225 NP_286759.1 hypothetical protein Not tested TAI Protein 7e-22 91
unnamed CAE85206.1 hypothetical protein Not tested PAI V 536 Protein 6e-28 90
Z1663 NP_287165.1 hypothetical protein Not tested TAI Protein 3e-28 90
unnamed AAL67387.1 L0009-like protein Not tested PAI II CFT073 Protein 9e-22 90
c5147 NP_756995.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-21 90
unnamed CAD42103.1 hypothetical protein Not tested PAI II 536 Protein 1e-25 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcE24377A_3415 YP_001464412.1 hypothetical protein VFG0665 Protein 2e-22 94
EcE24377A_3415 YP_001464412.1 hypothetical protein VFG1684 Protein 4e-29 93
EcE24377A_3415 YP_001464412.1 hypothetical protein VFG1532 Protein 2e-29 93
EcE24377A_3415 YP_001464412.1 hypothetical protein VFG1071 Protein 2e-22 91
EcE24377A_3415 YP_001464412.1 hypothetical protein VFG1622 Protein 6e-26 85