Gene Information

Name : EcE24377A_3414 (EcE24377A_3414)
Accession : YP_001464411.1
Strain : Escherichia coli E24377A
Genome accession: NC_009801
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3424039 - 3424527 bp
Length : 489 bp
Strand : +
Note : identified by similarity to GB:ABB61173.1

DNA sequence :
ATGAAACTGGCCCTGACGCTGGAAGCCGACAGCATTAACGTGCAGGCACTGAACATGGGGCGCATTGTCGTTGACGTCGA
TGGTGTTAATCTCACTGAACTGATTAACAAGGTTGCTGAAAATGGTCATTCACTCCGCGTAGTGGATGAATCTGGCCAAC
AGTCAACCTGCACACCACCACCGTTTACGGCCCTTGCCGGCATACGCTGCAGTACCGCACATATCACGGAAAAGGACAAC
GCCTGGCTGTACTCGCTGTCACATCAGACGAATGACTTCGGCGAATCAGAATGGATTCATTTCACAGGTAGCGGCTATCT
GTTACGTACCGATGCGTGGTCATACCCGGTTCTGCGGCTCAAGCGCCTGGGGCTGTCAAAAACGTTCCGTCGTCTGGTTG
TCACACTTACCCGACGTTATGGCGTCAGTCTCATTCATCTGGATGCCAGCGCTGAATGCCTGCCGGGTTTACCCACGTTC
AACTGGTAA

Protein sequence :
MKLALTLEADSINVQALNMGRIVVDVDGVNLTELINKVAENGHSLRVVDESGQQSTCTPPPFTALAGIRCSTAHITEKDN
AWLYSLSHQTNDFGESEWIHFTGSGYLLRTDAWSYPVLRLKRLGLSKTFRRLVVTLTRRYGVSLIHLDASAECLPGLPTF
NW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c5148 NP_756996.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-63 96
yeeW CAE85205.1 YeeW protein Not tested PAI V 536 Protein 1e-62 94
yeeW CAI43849.1 YeeW protein Not tested LEE Protein 2e-62 93
aec77 AAW51760.1 Aec77 Not tested AGI-3 Protein 1e-60 92
yeeW ADD91698.1 YeeW Not tested PAI-I AL862 Protein 5e-62 92
yeeW AAZ04462.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 8e-58 90
APECO1_3485 YP_854326.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-57 90
unnamed CAD42102.1 hypothetical protein Not tested PAI II 536 Protein 3e-57 88
ECO103_3593 YP_003223450.1 hypothetical protein Not tested LEE Protein 2e-60 88
yeeW NP_838488.1 hypothetical protein Not tested SHI-1 Protein 8e-58 88
yeeW NP_708774.1 hypothetical protein Not tested SHI-1 Protein 8e-58 88
unnamed AAC31487.1 L0008 Not tested LEE Protein 7e-58 88
Z5092 NP_290243.1 hypothetical protein Not tested LEE Protein 9e-58 88
unnamed ACU09434.1 conserved hypothetical protein Not tested LEE Protein 7e-58 88
ECs4540 NP_312567.1 hypothetical protein Not tested LEE Protein 9e-58 88
unnamed CAI43904.1 hypothetical protein Not tested LEE Protein 4e-56 87
Z1662 NP_287164.1 hypothetical protein Not tested TAI Protein 4e-58 87
Z1223 NP_286758.1 hypothetical protein Not tested TAI Protein 4e-58 87
unnamed CAD66208.1 hypothetical protein Not tested PAI III 536 Protein 8e-56 87
unnamed AAK00483.1 unknown Not tested SHI-1 Protein 7e-51 87
unnamed AAL57574.1 unknown Not tested LEE Protein 2e-49 86
unnamed AAL08479.1 unknown Not tested SRL Protein 3e-57 86
z5092 CAD33790.1 Z5092 protein Not tested PAI I 536 Protein 8e-54 83

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcE24377A_3414 YP_001464411.1 hypothetical protein VFG1621 Protein 1e-57 88
EcE24377A_3414 YP_001464411.1 hypothetical protein VFG0664 Protein 2e-58 88
EcE24377A_3414 YP_001464411.1 hypothetical protein VFG0787 Protein 3e-58 88
EcE24377A_3414 YP_001464411.1 hypothetical protein VFG1683 Protein 3e-56 87
EcE24377A_3414 YP_001464411.1 hypothetical protein VFG1070 Protein 1e-57 86
EcE24377A_3414 YP_001464411.1 hypothetical protein VFG1531 Protein 3e-54 83