Gene Information

Name : EcE24377A_3412 (EcE24377A_3412)
Accession : YP_001464409.1
Strain : Escherichia coli E24377A
Genome accession: NC_009801
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3423207 - 3423575 bp
Length : 369 bp
Strand : +
Note : identified by similarity to GB:AAP18296.1; match to protein family HMM PF06154

DNA sequence :
GTGTCAGACACATTCTCCGGGACAACGCATCCCGATGACAATCACGACCGCCCCTGGTGGGGGCTGCCCTGTACCGTGAC
ACCTTGTTTTGGCGCCCGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAGGCCTGT
TCAGCGATGCGGATGCATACCATCTGGACCAGGCCTTTCCGCTGCTGATGAAACAACTGGAACTCATGCTCACCAGCGGT
GAACTGAATCCCCGCCATCAGCATACCGTCACGCTGTATGCTAAAGGGCTGACCTGCGATGCCGACACCCTCGGCTCCTG
TGGTTACGTTTATCTGGCTGTTTATCCGACCCCCGAAACGAAAAAGTAA

Protein sequence :
MSDTFSGTTHPDDNHDRPWWGLPCTVTPCFGARLVQEGNRLHYLADRAGIRGLFSDADAYHLDQAFPLLMKQLELMLTSG
ELNPRHQHTVTLYAKGLTCDADTLGSCGYVYLAVYPTPETKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 7e-51 96
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 6e-52 96
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 4e-51 95
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 2e-51 95
c5150 NP_756998.1 hypothetical protein Not tested PAI II CFT073 Protein 6e-51 95
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 2e-50 94
yeeU CAE85203.1 YeeU protein Not tested PAI V 536 Protein 1e-50 94
yeeU AAZ04460.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 6e-51 94
yeeU YP_854324.1 hypothetical protein Not tested PAI I APEC-O1 Protein 8e-51 94
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 2e-50 93
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 2e-50 93
Z1220 NP_286755.1 structural protein Not tested TAI Protein 2e-48 92
Z1658 NP_287161.1 structural protein Not tested TAI Protein 2e-48 92
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 4e-50 92
unnamed CAI43903.1 hypothetical protein Not tested LEE Protein 3e-50 92
unnamed AAL57576.1 unknown Not tested LEE Protein 7e-50 91
unnamed AAL08477.1 unknown Not tested SRL Protein 3e-48 90
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 3e-47 89
unnamed AAL67343.1 intergenic-region protein Not tested PAI II CFT073 Protein 1e-47 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcE24377A_3412 YP_001464409.1 hypothetical protein VFG1681 Protein 3e-51 96
EcE24377A_3412 YP_001464409.1 hypothetical protein VFG1619 Protein 8e-52 95
EcE24377A_3412 YP_001464409.1 hypothetical protein VFG0662 Protein 7e-51 93
EcE24377A_3412 YP_001464409.1 hypothetical protein VFG1068 Protein 1e-48 90