Gene Information

Name : EcE24377A_3409 (EcE24377A_3409)
Accession : YP_001464406.1
Strain : Escherichia coli E24377A
Genome accession: NC_009801
Putative virulence/resistance : Virulence
Product : antirestriction protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3421842 - 3422327 bp
Length : 486 bp
Strand : +
Note : identified by match to protein family HMM PF03230

DNA sequence :
ATGACAACCTCTTCGCATAATTCCACCACACCTTCTGTTTCCGTAACTACTGCATCAGGGAATAACCAGTCTCAGCTGGT
TGCCACCCCCGTCCCTGATGAACAGCGCGTCAGTTTCTGGCCGCAGCACTTTGGTCTCATTCCACAGTGGGTGACCCTGG
AGCCCCGGGTCTTCGGCTGGATGGACCGTCTGTGTGAAGACTACTGCGGTGGTATCTGGAGTCTGTATACCCTGAACAAC
GGTGGCGCATTTATGGCCCCCGAACCGGATGACGATGATGACGAAACATGGGTACTGTTCAATGCCATGAACGGTAACCG
CGCTGAAATGAGTCCGGAAGCTGCCGGCATTGCCGCCTGTCTGATGGCGTACAGTCATCACGCCTGTCGTACAGAGAATT
ATGCCATGACGGTCCACTATTACCGGCTGCGGGATTACGCCCTGCAGCATCCGGAATGCAGCGCCATTATGCGCATCATC
GATTGA

Protein sequence :
MTTSSHNSTTPSVSVTTASGNNQSQLVATPVPDEQRVSFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWSLYTLNN
GGAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMAYSHHACRTENYAMTVHYYRLRDYALQHPECSAIMRII
D

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 2e-59 98
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 3e-58 96
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 5e-58 96
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 5e-58 96
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 4e-63 96
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 8e-56 96
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 1e-62 95
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 9e-64 95
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 7e-56 95
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 9e-56 93
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 9e-56 93
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-56 93
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 5e-56 93
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 7e-62 93
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 4e-62 93
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 4e-56 93
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 5e-60 92

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcE24377A_3409 YP_001464406.1 antirestriction protein VFG1677 Protein 2e-63 96
EcE24377A_3409 YP_001464406.1 antirestriction protein VFG1616 Protein 4e-64 95
EcE24377A_3409 YP_001464406.1 antirestriction protein VFG1527 Protein 4e-63 95
EcE24377A_3409 YP_001464406.1 antirestriction protein VFG0659 Protein 2e-56 93