Gene Information

Name : EcE24377A_3392 (EcE24377A_3392)
Accession : YP_001464389.1
Strain : Escherichia coli E24377A
Genome accession: NC_009801
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3413447 - 3414049 bp
Length : 603 bp
Strand : -
Note : identified by glimmer

DNA sequence : 
TTGTGGGCTGCGCATAACGGAACATATCTTATGAATGGTATTCCTTATTTCGACTATAGCATGGCGCCTTTCTGGCCGTC
TTATCAGAACAAAATCATCGGTGTTCTCAACCGTGCGTTGCGTGAACAGTCCTGCGCCCGGGTACGGCGGATCCTGCTTC
GCCTGCCGGGGGAACATGACAACATCTTCAGTGACAGAAATACCTGGTTAGGCATGGATTTTATCGAAACCGTCAGTGCG
CTGATGAATGCAACCCCCGGACGTGATCTCTGCTGGCTCCTGACCCGTCATCCGGAAAAGCTGGAATACCACGTGGTGCT
GTGCGTCAGACAGGAGTATTTCGACGGCCCTGAGCTGGACCGGTTGATTCTGGATGCCTGGAGCAACGTACTGGGCTTCG
CGTCACCGGGTGAAGCAAAGCAGTACCAGAAGCAGATTACCCGGGATGTACTGCTGGACAGTCGTTCACCGGACTGCGAA
GAGAGACTCAAAGAGCTGATATGGGCGTTCAGTGATTTCGCCCGCGATCGTCGTGGTGTGCGCGATCCGGAAGCCCGTTA
CCTCGCCGGTAACCCCTGGTATCCCGTAGCAGGCCAGTTCTGA

Protein sequence : 
MWAAHNGTYLMNGIPYFDYSMAPFWPSYQNKIIGVLNRALREQSCARVRRILLRLPGEHDNIFSDRNTWLGMDFIETVSA
LMNATPGRDLCWLLTRHPEKLEYHVVLCVRQEYFDGPELDRLILDAWSNVLGFASPGEAKQYQKQITRDVLLDSRSPDCE
ERLKELIWAFSDFARDRRGVRDPEARYLAGNPWYPVAGQF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33738.1 hypothetical protein Not tested PAI I 536 Protein 1e-75 87
unnamed CAD42061.1 hypothetical protein Not tested PAI II 536 Protein 9e-71 87
ORF_19 AAZ04429.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-72 86
APECO1_3515 YP_854260.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-72 86
c5193 NP_757041.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-80 86
unnamed AAL67421.1 unknown Not tested PAI II CFT073 Protein 6e-58 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcE24377A_3392 YP_001464389.1 hypothetical protein VFG1479 Protein 5e-76 87
EcE24377A_3392 YP_001464389.1 hypothetical protein VFG1580 Protein 4e-71 87