Gene Information

Name : EcE24377A_3391 (EcE24377A_3391)
Accession : YP_001464388.1
Strain : Escherichia coli E24377A
Genome accession: NC_009801
Putative virulence/resistance : Virulence
Product : prophage CP4-57 regulatory protein
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 3413148 - 3413378 bp
Length : 231 bp
Strand : -
Note : identified by match to protein family HMM PF05930

DNA sequence :
ATGTTGACCTCAATAACAGGCCACGACAGTGTATTGCTGCGTGCCGACGATCCCCTGATCGACATGAATTACATCACCAG
CTTCACCGGTATGACTGACAAATGGTTTTACAAGTTGATCAGTGAAGGCCATTTCCCTAAACCCATCAAACTGGGGCGCA
GCAGCCGCTGGTACAAAAGTGAAGTGGAGCAGTGGATGCAGCAGCGAATCGAGGAGTCACGAGGAGAATGA

Protein sequence :
MLTSITGHDSVLLRADDPLIDMNYITSFTGMTDKWFYKLISEGHFPKPIKLGRSSRWYKSEVEQWMQQRIEESRGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33739.1 hypothetical protein Not tested PAI I 536 Protein 2e-29 95
c5192 NP_757040.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-29 95
Z1188 NP_286723.1 hypothetical protein Not tested TAI Protein 2e-23 91
Z1627 NP_287131.1 hypothetical protein Not tested TAI Protein 2e-23 91
rox AAR97599.1 regulator of excision Not tested SHI-1 Protein 2e-17 70
unnamed CAE85187.1 hypothetical protein Not tested PAI V 536 Protein 8e-18 70
S3190 NP_838473.1 hypothetical protein Not tested SHI-1 Protein 2e-17 70
SF2987 NP_708761.1 hypothetical protein Not tested SHI-1 Protein 2e-17 70
ECO103_3577 YP_003223438.1 transcriptional regulator Not tested LEE Protein 1e-17 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcE24377A_3391 YP_001464388.1 prophage CP4-57 regulatory protein VFG1480 Protein 7e-30 95
EcE24377A_3391 YP_001464388.1 prophage CP4-57 regulatory protein VFG0651 Protein 7e-18 70